Variant report

Variant rs11834340
Chromosome Location chr12:1173685-1173686
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:29 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:1153400-1200400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr12:1163800-1200200 Weak transcription Ovary ovary
3 chr12:1169000-1183400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
4 chr12:1169800-1175200 ZNF genes & repeats Primary hematopoietic stem cells blood
5 chr12:1170000-1192600 Weak transcription Muscle Satellite Cultured Cells --
6 chr12:1171400-1173800 ZNF genes & repeats Primary T cells from cord blood blood
7 chr12:1171600-1174000 ZNF genes & repeats Primary B cells from cord blood blood
8 chr12:1171600-1174000 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
9 chr12:1171600-1174200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
10 chr12:1172000-1174000 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
11 chr12:1172200-1173800 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
12 chr12:1172200-1174000 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr12:1172600-1174000 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
14 chr12:1172800-1173800 ZNF genes & repeats Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr12:1172800-1173800 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
16 chr12:1172800-1174000 ZNF genes & repeats Colon Smooth Muscle Colon
17 chr12:1172800-1174000 ZNF genes & repeats Fetal Lung lung
18 chr12:1172800-1174200 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
19 chr12:1172800-1176400 Weak transcription Thymus Thymus
20 chr12:1173000-1174000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr12:1173200-1174000 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr12:1173200-1174400 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr12:1173400-1173800 ZNF genes & repeats Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr12:1173400-1173800 Weak transcription Fetal Heart heart
25 chr12:1173400-1174000 ZNF genes & repeats Primary T killer naive cells fromperipheralblood blood
26 chr12:1173400-1174000 ZNF genes & repeats Fetal Intestine Small intestine
27 chr12:1173400-1175000 Weak transcription Primary T helper naive cells from peripheral blood blood
28 chr12:1173400-1177200 Weak transcription Liver Liver
29 chr12:1173600-1174200 ZNF genes & repeats A549 lung

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