Variant report
| Variant | rs11834444 |
|---|---|
| Chromosome Location | chr12:46886880-46886881 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:46868600-46889200 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 2 | chr12:46871200-46887800 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 3 | chr12:46878000-46887400 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 4 | chr12:46878200-46887000 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 5 | chr12:46880600-46888600 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 6 | chr12:46881800-46888000 | Weak transcription | Primary hematopoietic stem cells | blood |
| 7 | chr12:46882400-46888600 | Enhancers | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 8 | chr12:46882600-46889600 | Weak transcription | Primary B cells from cord blood | blood |
| 9 | chr12:46882800-46894200 | Weak transcription | Primary B cells from peripheral blood | blood |
| 10 | chr12:46883000-46888800 | Enhancers | HMEC | breast |
| 11 | chr12:46883200-46887800 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 12 | chr12:46883200-46889000 | Enhancers | NHEK | skin |
| 13 | chr12:46883400-46887600 | Enhancers | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 14 | chr12:46883400-46887800 | Enhancers | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 15 | chr12:46883400-46888800 | Enhancers | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 16 | chr12:46883800-46887400 | Enhancers | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 17 | chr12:46884000-46888200 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 18 | chr12:46884200-46888000 | Weak transcription | Fetal Stomach | stomach |
| 19 | chr12:46884200-46888600 | Weak transcription | Pancreas | Pancrea |
| 20 | chr12:46884400-46887400 | Weak transcription | Rectal Smooth Muscle | rectum |
| 21 | chr12:46884400-46889000 | Enhancers | Osteobl | bone |
| 22 | chr12:46884600-46887800 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 23 | chr12:46884800-46887600 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 24 | chr12:46884800-46887800 | Weak transcription | Colon Smooth Muscle | Colon |
| 25 | chr12:46884800-46888600 | Weak transcription | Left Ventricle | heart |
| 26 | chr12:46885000-46887800 | Weak transcription | Adipose Nuclei | Adipose |
| 27 | chr12:46885400-46889000 | Enhancers | Liver | Liver |
| 28 | chr12:46885600-46888800 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 29 | chr12:46885800-46887000 | Flanking Active TSS | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 30 | chr12:46885800-46887000 | Enhancers | Stomach Mucosa | stomach |
| 31 | chr12:46885800-46887200 | Enhancers | Placenta | Placenta |
| 32 | chr12:46885800-46887600 | Flanking Active TSS | A549 | lung |
| 33 | chr12:46885800-46888800 | Enhancers | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 34 | chr12:46886000-46887800 | Enhancers | HSMMtube | muscle |
| 35 | chr12:46886000-46888600 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
| 36 | chr12:46886000-46888600 | Flanking Active TSS | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 37 | chr12:46886000-46889000 | Enhancers | Fetal Lung | lung |
| 38 | chr12:46886000-46889000 | Enhancers | HSMM | muscle |
| 39 | chr12:46886000-46889000 | Enhancers | NHDF-Ad | bronchial |
| 40 | chr12:46886200-46887800 | Enhancers | HUES64 Cell Line | embryonic stem cell |
| 41 | chr12:46886200-46888800 | Enhancers | Fetal Heart | heart |
| 42 | chr12:46886400-46888800 | Enhancers | HUVEC | blood vessel |
| 43 | chr12:46886400-46889000 | Enhancers | HUES48 Cell Line | embryonic stem cell |
| 44 | chr12:46886600-46887000 | Enhancers | NH-A | brain |
| 45 | chr12:46886600-46887400 | Flanking Active TSS | HepG2 | liver |
| 46 | chr12:46886600-46887600 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 47 | chr12:46886600-46888200 | Enhancers | Pancreatic Islets | Pancreatic Islet |
| 48 | chr12:46886600-46888200 | Weak transcription | Right Ventricle | heart |
| 49 | chr12:46886600-46888800 | Flanking Active TSS | NHLF | lung |
| 50 | chr12:46886600-46890400 | Weak transcription | H9 Cell Line | embryonic stem cell |
