Variant report

Variant	rs11835005
Chromosome Location	chr12:117731829-117731830
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs2271987	0.92[CHB][hapmap];0.90[CHD][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs3782201	0.88[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs59309826	0.96[ASN][1000 genomes]
rs60147700	0.96[ASN][1000 genomes]
rs73405453	0.89[ASN][1000 genomes]
rs9658327	0.87[ASW][hapmap];0.81[LWK][hapmap]
rs9658335	0.92[CHB][hapmap];0.87[CHD][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs9658336	0.92[CHB][hapmap];0.95[ASN][1000 genomes]
rs9658340	1.00[ASW][hapmap]
rs9658341	0.84[ASW][hapmap]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:117697200-117746200	Weak transcription	Brain Anterior Caudate	brain
2	chr12:117722400-117732000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr12:117728000-117771200	Weak transcription	Skeletal Muscle Female	skeletal muscle
4	chr12:117728600-117732200	Weak transcription	NHEK	skin
5	chr12:117731600-117732600	Enhancers	Brain Germinal Matrix	brain
6	chr12:117731800-117732400	Enhancers	HUES6 Cell Line	embryonic stem cell
7	chr12:117731800-117732400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
8	chr12:117731800-117732800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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