Variant report

Variant	rs11835398
Chromosome Location	chr12:10892139-10892140
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs1042085	0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11053918	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11053919	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2607903	0.87[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs73046505	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:10886400-10892400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
2	chr12:10891600-10892600	Enhancers	A549	lung
3	chr12:10891600-10893400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
4	chr12:10891600-10893800	Enhancers	K562	blood
5	chr12:10891800-10893000	Enhancers	Hela-S3	cervix
6	chr12:10892000-10893000	Enhancers	ES-WA7 Cell Line	embryonic stem cell
7	chr12:10892000-10893400	Enhancers	ES-I3 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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