Variant report

Variant rs11842
Chromosome Location chr2:47403383-47403384
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:47399200-47404400 Active TSS HSMMtube muscle
2 chr2:47399800-47404200 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
3 chr2:47399800-47404400 Active TSS Stomach Smooth Muscle stomach
4 chr2:47400000-47404000 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
5 chr2:47400000-47404600 Active TSS Psoas Muscle Psoas
6 chr2:47400400-47405200 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
7 chr2:47400600-47404600 Active TSS Pancreatic Islets Pancreatic Islet
8 chr2:47400800-47404000 Active TSS NH-A brain
9 chr2:47400800-47404400 Active TSS ES-I3 Cell Line embryonic stem cell
10 chr2:47400800-47404400 Active TSS Fetal Intestine Small intestine
11 chr2:47400800-47404400 Active TSS Ovary ovary
12 chr2:47401000-47403400 Active TSS Aorta Aorta
13 chr2:47401000-47404000 Active TSS HUES6 Cell Line embryonic stem cell
14 chr2:47401000-47404000 Active TSS HMEC breast
15 chr2:47401000-47404200 Active TSS H1 Cell Line embryonic stem cell
16 chr2:47401000-47404200 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr2:47401000-47404200 Active TSS iPS-15b Cell Line embryonic stem cell
18 chr2:47401000-47404200 Active TSS ES-UCSF4 Cell Line embryonic stem cell
19 chr2:47401000-47404200 Active TSS Brain Inferior Temporal Lobe brain
20 chr2:47401000-47404200 Active TSS Brain Dorsolateral Prefrontal Cortex brain
21 chr2:47401000-47404200 Active TSS Duodenum Mucosa Duodenum
22 chr2:47401000-47404200 Active TSS Fetal Intestine Large intestine
23 chr2:47401000-47404200 Active TSS Rectal Smooth Muscle rectum
24 chr2:47401000-47404200 Active TSS NHDF-Ad bronchial
25 chr2:47401000-47404400 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr2:47401000-47404400 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
27 chr2:47401000-47404400 Active TSS Brain Anterior Caudate brain
28 chr2:47401000-47404400 Active TSS Brain Hippocampus Middle brain
29 chr2:47401000-47404400 Active TSS Fetal Brain Female brain
30 chr2:47401000-47404400 Active TSS Fetal Kidney kidney
31 chr2:47401000-47404400 Active TSS GM12878-XiMat blood
32 chr2:47401000-47404600 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr2:47401000-47404600 Active TSS Right Ventricle heart
34 chr2:47401200-47404000 Active TSS Cortex derived primary cultured neurospheres brain
35 chr2:47401200-47404200 Active TSS HUES48 Cell Line embryonic stem cell
36 chr2:47401200-47404200 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr2:47401200-47404200 Active TSS Brain Angular Gyrus brain
38 chr2:47401200-47404200 Active TSS Brain Cingulate Gyrus brain
39 chr2:47401200-47404200 Active TSS NHLF lung
40 chr2:47401200-47404400 Active TSS Fetal Stomach stomach
41 chr2:47401200-47404400 Active TSS Rectal Mucosa Donor 29 rectum
42 chr2:47401200-47404600 Active TSS ES-WA7 Cell Line embryonic stem cell
43 chr2:47401200-47404600 Active TSS Brain Substantia Nigra brain
44 chr2:47401200-47404600 Active TSS Colon Smooth Muscle Colon
45 chr2:47401400-47404000 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr2:47401400-47404200 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
47 chr2:47401400-47404200 Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
48 chr2:47401400-47404200 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr2:47401400-47404200 Active TSS HUES64 Cell Line embryonic stem cell
50 chr2:47401400-47404200 Active TSS iPS-20b Cell Line embryonic stem cell

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