The 2.0 version of rSNPBase

Variant report

Variant rs11850821
Chromosome Location chr14:105175085-105175086
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:105162200-105189800 Weak transcription Primary hematopoietic stem cells blood
2 chr14:105162800-105189800 Weak transcription Primary T helper naive cells from peripheral blood blood
3 chr14:105162800-105190000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
4 chr14:105162800-105190000 Weak transcription Primary T killer memory cells from peripheral blood blood
5 chr14:105164200-105189600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr14:105164400-105188000 Strong transcription Sigmoid Colon Sigmoid Colon
7 chr14:105165600-105175600 Weak transcription Stomach Mucosa stomach
8 chr14:105166400-105175200 Strong transcription NHLF lung
9 chr14:105166400-105190000 Weak transcription Small Intestine intestine
10 chr14:105167200-105188400 Strong transcription Lung lung
11 chr14:105168200-105179400 Weak transcription Fetal Kidney kidney
12 chr14:105170600-105177800 Weak transcription Primary T helper cells PMA-I stimulated --
13 chr14:105170800-105175200 Weak transcription Left Ventricle heart
14 chr14:105170800-105179400 Weak transcription Primary monocytes fromperipheralblood blood
15 chr14:105170800-105182000 Weak transcription Primary B cells from cord blood blood
16 chr14:105171000-105175400 Weak transcription Rectal Smooth Muscle rectum
17 chr14:105171000-105178000 Weak transcription Hela-S3 cervix
18 chr14:105171000-105178400 Weak transcription HUVEC blood vessel
19 chr14:105171000-105188600 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr14:105171000-105189400 Strong transcription Fetal Intestine Large intestine
21 chr14:105171200-105176200 Weak transcription HepG2 liver
22 chr14:105171200-105176400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr14:105171400-105175800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr14:105171400-105176400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
25 chr14:105171400-105176600 Weak transcription Primary T cells from cord blood blood
26 chr14:105171400-105176600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
27 chr14:105171400-105176800 Weak transcription Monocytes-CD14+_RO01746 blood
28 chr14:105171400-105178800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
29 chr14:105171400-105189800 Weak transcription GM12878-XiMat blood
30 chr14:105171600-105175600 Weak transcription NHEK skin
31 chr14:105171800-105175200 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
32 chr14:105171800-105177200 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
33 chr14:105172000-105175800 Genic enhancers Foreskin Melanocyte Primary Cells skin01 Skin
34 chr14:105172000-105175800 Genic enhancers A549 lung
35 chr14:105172200-105177800 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr14:105172200-105178400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
37 chr14:105172400-105175200 Genic enhancers Placenta Placenta
38 chr14:105172400-105176400 Weak transcription H9 Cell Line embryonic stem cell
39 chr14:105172400-105176400 Weak transcription Ovary ovary
40 chr14:105172600-105175400 Genic enhancers Brain Hippocampus Middle brain
41 chr14:105172600-105175400 Weak transcription HMEC breast
42 chr14:105172600-105176400 Weak transcription Fetal Brain Female brain
43 chr14:105172600-105176600 Weak transcription iPS-15b Cell Line embryonic stem cell
44 chr14:105172800-105176200 Weak transcription Esophagus oesophagus
45 chr14:105172800-105176600 Weak transcription Aorta Aorta
46 chr14:105172800-105176800 Weak transcription NHDF-Ad bronchial
47 chr14:105173000-105175400 Enhancers H1 Cell Line embryonic stem cell
48 chr14:105173000-105176400 Genic enhancers Fetal Stomach stomach
49 chr14:105173200-105175200 Weak transcription Primary hematopoietic stem cells short term culture blood
50 chr14:105173200-105175400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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Last update: Aug 31, 2015