The 2.0 version of rSNPBase

Variant report

Variant rs11869855
Chromosome Location chr17:38117653-38117654
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:34 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:38110000-38118800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr17:38110200-38118600 Weak transcription Primary T regulatory cells fromperipheralblood blood
3 chr17:38110200-38118600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr17:38110800-38128800 Weak transcription Gastric stomach
5 chr17:38111600-38126800 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr17:38115600-38118200 Weak transcription Primary T killer memory cells from peripheral blood blood
7 chr17:38115600-38118400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
8 chr17:38115600-38118400 Weak transcription Primary T helper naive cells from peripheral blood blood
9 chr17:38115600-38118600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
10 chr17:38115600-38118800 Weak transcription Brain Inferior Temporal Lobe brain
11 chr17:38115600-38118800 Weak transcription HMEC breast
12 chr17:38115600-38118800 Weak transcription NHEK skin
13 chr17:38115600-38119000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr17:38115600-38125000 Weak transcription Duodenum Mucosa Duodenum
15 chr17:38115800-38118200 Weak transcription Fetal Thymus thymus
16 chr17:38115800-38118400 Weak transcription Primary T helper naive cells fromperipheralblood blood
17 chr17:38115800-38118400 Weak transcription Primary T helper cells PMA-I stimulated --
18 chr17:38115800-38118400 Weak transcription Primary T helper cells fromperipheralblood blood
19 chr17:38115800-38118400 Weak transcription Primary T killer naive cells fromperipheralblood blood
20 chr17:38115800-38118800 Weak transcription Primary T cells fromperipheralblood blood
21 chr17:38115800-38118800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
22 chr17:38115800-38118800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
23 chr17:38115800-38119000 Weak transcription Breast Myoepithelial Primary Cells Breast
24 chr17:38115800-38121000 Weak transcription Primary monocytes fromperipheralblood blood
25 chr17:38115800-38123000 Weak transcription Primary neutrophils fromperipheralblood blood
26 chr17:38116200-38120200 Weak transcription Primary B cells from peripheral blood blood
27 chr17:38116200-38123400 Weak transcription Primary B cells from cord blood blood
28 chr17:38116600-38117800 Enhancers Fetal Intestine Small intestine
29 chr17:38116800-38119000 Weak transcription H1 Cell Line embryonic stem cell
30 chr17:38116800-38119000 Weak transcription Colonic Mucosa Colon
31 chr17:38117200-38117800 Bivalent Enhancer HepG2 liver
32 chr17:38117200-38119000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr17:38117400-38117800 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
34 chr17:38117600-38117800 Enhancers Fetal Intestine Large intestine

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Last update: Aug 31, 2015