Variant report

Variant rs11871958
Chromosome Location chr17:16342833-16342834
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:16341400-16343000 Active TSS H1 Cell Line embryonic stem cell
2 chr17:16341400-16343000 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
3 chr17:16341400-16343000 Active TSS iPS-18 Cell Line embryonic stem cell
4 chr17:16341400-16343000 Active TSS Duodenum Smooth Muscle Duodenum
5 chr17:16341400-16343200 Active TSS Brain Anterior Caudate brain
6 chr17:16341400-16343200 Active TSS Brain Dorsolateral Prefrontal Cortex brain
7 chr17:16341400-16343400 Active TSS ES-UCSF4 Cell Line embryonic stem cell
8 chr17:16341400-16344400 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
9 chr17:16341600-16343000 Active TSS Brain Angular Gyrus brain
10 chr17:16341600-16343000 Active TSS Brain Substantia Nigra brain
11 chr17:16341600-16343200 Active TSS Fetal Brain Male brain
12 chr17:16341600-16343200 Active TSS Fetal Kidney kidney
13 chr17:16341600-16343200 Active TSS Psoas Muscle Psoas
14 chr17:16341600-16343200 Active TSS Right Atrium heart
15 chr17:16341600-16343400 Active TSS Colonic Mucosa Colon
16 chr17:16341600-16343400 Active TSS Pancreatic Islets Pancreatic Islet
17 chr17:16341600-16343400 Active TSS Ovary ovary
18 chr17:16341600-16343400 Active TSS Stomach Mucosa stomach
19 chr17:16341600-16343800 Active TSS ES-WA7 Cell Line embryonic stem cell
20 chr17:16341600-16343800 Flanking Active TSS Primary hematopoietic stem cells blood
21 chr17:16341600-16343800 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
22 chr17:16341600-16344000 Flanking Active TSS Primary neutrophils fromperipheralblood blood
23 chr17:16341800-16343000 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr17:16341800-16343000 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
25 chr17:16341800-16343000 Active TSS Fetal Stomach stomach
26 chr17:16341800-16343000 Active TSS Rectal Smooth Muscle rectum
27 chr17:16341800-16343000 Active TSS HSMM muscle
28 chr17:16341800-16343200 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr17:16341800-16343200 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr17:16341800-16343200 Active TSS Breast Myoepithelial Primary Cells Breast
31 chr17:16341800-16343200 Active TSS Right Ventricle heart
32 chr17:16341800-16343200 Active TSS NHDF-Ad bronchial
33 chr17:16341800-16343400 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
34 chr17:16341800-16343400 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
35 chr17:16341800-16343400 Active TSS Esophagus oesophagus
36 chr17:16341800-16343400 Active TSS Gastric stomach
37 chr17:16341800-16343400 Active TSS Left Ventricle heart
38 chr17:16341800-16343400 Active TSS Lung lung
39 chr17:16341800-16343400 Active TSS Sigmoid Colon Sigmoid Colon
40 chr17:16341800-16343600 Active TSS Aorta Aorta
41 chr17:16341800-16345400 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
42 chr17:16342000-16343000 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr17:16342000-16343000 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
44 chr17:16342000-16343000 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
45 chr17:16342000-16343000 Active TSS Primary T helper memory cells from peripheral blood 2 blood
46 chr17:16342000-16343000 Active TSS Primary T helper naive cells from peripheral blood blood
47 chr17:16342000-16343000 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
48 chr17:16342000-16343000 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr17:16342000-16343000 Active TSS Brain Cingulate Gyrus brain
50 chr17:16342000-16343000 Active TSS Brain Inferior Temporal Lobe brain

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