The 2.0 version of rSNPBase

Variant report

Variant rs11872531
Chromosome Location chr18:44689234-44689235
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:98 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:44677600-44700200 Weak transcription Aorta Aorta
2 chr18:44677800-44689800 Weak transcription Rectal Smooth Muscle rectum
3 chr18:44677800-44693400 Weak transcription Gastric stomach
4 chr18:44677800-44698200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr18:44677800-44699000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
6 chr18:44677800-44700400 Weak transcription Spleen Spleen
7 chr18:44677800-44701000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr18:44677800-44701000 Weak transcription Brain Inferior Temporal Lobe brain
9 chr18:44677800-44701000 Weak transcription A549 lung
10 chr18:44677800-44701800 Weak transcription Esophagus oesophagus
11 chr18:44678000-44699600 Weak transcription Colon Smooth Muscle Colon
12 chr18:44678000-44700400 Weak transcription Small Intestine intestine
13 chr18:44678000-44700800 Weak transcription Cortex derived primary cultured neurospheres brain
14 chr18:44678000-44701000 Weak transcription Fetal Stomach stomach
15 chr18:44678200-44689800 Weak transcription HSMMtube muscle
16 chr18:44678200-44690800 Weak transcription Fetal Intestine Small intestine
17 chr18:44678200-44692400 Weak transcription Thymus Thymus
18 chr18:44678200-44692600 Weak transcription NHLF lung
19 chr18:44678200-44700200 Weak transcription Brain Angular Gyrus brain
20 chr18:44678200-44700800 Weak transcription Primary T regulatory cells fromperipheralblood blood
21 chr18:44678200-44701000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr18:44678200-44701200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
23 chr18:44678200-44701200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
24 chr18:44678400-44689800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
25 chr18:44678400-44690000 Weak transcription Primary T helper cells PMA-I stimulated --
26 chr18:44678400-44692200 Weak transcription Right Ventricle heart
27 chr18:44678400-44695400 Weak transcription Primary T helper naive cells from peripheral blood blood
28 chr18:44678400-44700000 Weak transcription Psoas Muscle Psoas
29 chr18:44678400-44700800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
30 chr18:44678400-44700800 Weak transcription Lung lung
31 chr18:44678600-44691200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
32 chr18:44678600-44699000 Weak transcription Dnd41 blood
33 chr18:44681200-44689600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
34 chr18:44681200-44689600 Weak transcription Primary B cells from peripheral blood blood
35 chr18:44681200-44689600 Weak transcription HepG2 liver
36 chr18:44681200-44692200 Weak transcription Ovary ovary
37 chr18:44681200-44699000 Weak transcription Breast Myoepithelial Primary Cells Breast
38 chr18:44681200-44699600 Weak transcription Fetal Muscle Leg muscle
39 chr18:44681200-44699600 Weak transcription Sigmoid Colon Sigmoid Colon
40 chr18:44681200-44699800 Weak transcription Left Ventricle heart
41 chr18:44681400-44699600 Weak transcription Primary T cells from cord blood blood
42 chr18:44681600-44700200 Weak transcription Fetal Kidney kidney
43 chr18:44681800-44689600 Weak transcription Placenta Amnion Placenta Amnion
44 chr18:44681800-44689600 Weak transcription Rectal Mucosa Donor 31 rectum
45 chr18:44681800-44690800 Weak transcription Primary hematopoietic stem cells short term culture blood
46 chr18:44681800-44692800 Weak transcription Skeletal Muscle Female skeletal muscle
47 chr18:44681800-44699400 Weak transcription Fetal Muscle Trunk muscle
48 chr18:44681800-44699800 Weak transcription Duodenum Smooth Muscle Duodenum
49 chr18:44681800-44700200 Weak transcription HSMM muscle
50 chr18:44681800-44700800 Weak transcription Primary T cells fromperipheralblood blood

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Last update: Aug 31, 2015