The 2.0 version of rSNPBase

Variant report

Variant rs1187592
Chromosome Location chr14:55053930-55053931
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:55036200-55073000 Weak transcription Pancreas Pancrea
2 chr14:55036400-55058200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr14:55037000-55058600 Weak transcription Spleen Spleen
4 chr14:55041000-55058400 Weak transcription Brain Cingulate Gyrus brain
5 chr14:55041400-55056800 Weak transcription Breast Myoepithelial Primary Cells Breast
6 chr14:55041400-55057600 Weak transcription ES-I3 Cell Line embryonic stem cell
7 chr14:55043400-55055000 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr14:55043400-55055600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr14:55043600-55064600 Weak transcription K562 blood
10 chr14:55044000-55055800 Weak transcription HMEC breast
11 chr14:55044000-55057800 Weak transcription HUES6 Cell Line embryonic stem cell
12 chr14:55044400-55056800 Weak transcription Placenta Amnion Placenta Amnion
13 chr14:55044400-55058000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
14 chr14:55044800-55056800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr14:55044800-55057800 Weak transcription Brain Substantia Nigra brain
16 chr14:55045000-55055400 Weak transcription HSMM muscle
17 chr14:55045000-55055600 Weak transcription Osteobl bone
18 chr14:55045000-55055800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr14:55045000-55055800 Weak transcription NH-A brain
20 chr14:55045000-55056800 Weak transcription Stomach Smooth Muscle stomach
21 chr14:55045000-55057200 Weak transcription Fetal Muscle Leg muscle
22 chr14:55045000-55060800 Weak transcription Adipose Nuclei Adipose
23 chr14:55045000-55066800 Weak transcription Brain Anterior Caudate brain
24 chr14:55045200-55056200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
25 chr14:55045200-55056600 Weak transcription HSMMtube muscle
26 chr14:55045200-55066600 Weak transcription Fetal Stomach stomach
27 chr14:55046800-55055600 Weak transcription Muscle Satellite Cultured Cells --
28 chr14:55047000-55056400 Weak transcription Duodenum Smooth Muscle Duodenum
29 chr14:55047000-55057200 Weak transcription Lung lung
30 chr14:55047000-55072800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
31 chr14:55047200-55056600 Weak transcription Rectal Smooth Muscle rectum
32 chr14:55047200-55056800 Weak transcription A549 lung
33 chr14:55047200-55072800 Weak transcription Brain Hippocampus Middle brain
34 chr14:55047600-55056800 Weak transcription Right Ventricle heart
35 chr14:55047600-55064400 Weak transcription Aorta Aorta
36 chr14:55048000-55055200 Weak transcription NHEK skin
37 chr14:55048200-55056200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
38 chr14:55048200-55072800 Weak transcription Fetal Muscle Trunk muscle
39 chr14:55048400-55057000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
40 chr14:55048800-55054200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr14:55048800-55056200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
42 chr14:55049200-55056200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr14:55049400-55055600 Weak transcription NHLF lung
44 chr14:55049400-55056600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
45 chr14:55049400-55067000 Weak transcription Ovary ovary
46 chr14:55049800-55056800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
47 chr14:55049800-55056800 Weak transcription Left Ventricle heart
48 chr14:55049800-55057000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
49 chr14:55050200-55056000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
50 chr14:55050400-55055800 Weak transcription HepG2 liver

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Last update: Aug 31, 2015