Variant report

Variant rs11880612
Chromosome Location chr19:18459106-18459107
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:113 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:18452200-18466200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr19:18452200-18466600 Weak transcription Ovary ovary
3 chr19:18452200-18468000 Weak transcription Aorta Aorta
4 chr19:18452400-18460200 Weak transcription Osteobl bone
5 chr19:18452400-18466600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr19:18452400-18466600 Weak transcription Right Ventricle heart
7 chr19:18452400-18468000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr19:18452400-18484800 Weak transcription Right Atrium heart
9 chr19:18452600-18461200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
10 chr19:18452600-18464000 Weak transcription Rectal Smooth Muscle rectum
11 chr19:18452600-18466400 Weak transcription Brain Angular Gyrus brain
12 chr19:18452600-18466400 Weak transcription Colon Smooth Muscle Colon
13 chr19:18452600-18466400 Weak transcription Fetal Lung lung
14 chr19:18452600-18466400 Weak transcription HSMMtube muscle
15 chr19:18452600-18466600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr19:18452600-18466600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
17 chr19:18452600-18466600 Weak transcription Muscle Satellite Cultured Cells --
18 chr19:18452600-18466600 Weak transcription Brain Inferior Temporal Lobe brain
19 chr19:18452600-18466600 Weak transcription Esophagus oesophagus
20 chr19:18452600-18466800 Weak transcription Brain Cingulate Gyrus brain
21 chr19:18452600-18467200 Weak transcription Primary B cells from cord blood blood
22 chr19:18452600-18467400 Weak transcription Primary T helper naive cells from peripheral blood blood
23 chr19:18452600-18467800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr19:18452600-18468000 Weak transcription HSMM muscle
25 chr19:18452600-18468200 Weak transcription NHDF-Ad bronchial
26 chr19:18452600-18476000 Weak transcription ES-WA7 Cell Line embryonic stem cell
27 chr19:18452600-18484400 Weak transcription Primary T killer naive cells fromperipheralblood blood
28 chr19:18452800-18461000 Weak transcription Fetal Thymus thymus
29 chr19:18452800-18466400 Weak transcription Primary T helper cells PMA-I stimulated --
30 chr19:18452800-18466600 Weak transcription Duodenum Smooth Muscle Duodenum
31 chr19:18452800-18466600 Weak transcription Pancreas Pancrea
32 chr19:18452800-18470400 Weak transcription Small Intestine intestine
33 chr19:18452800-18484600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
34 chr19:18453200-18460000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
35 chr19:18453200-18466400 Weak transcription Brain Anterior Caudate brain
36 chr19:18453400-18459600 Strong transcription Primary hematopoietic stem cells short term culture blood
37 chr19:18453400-18460000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr19:18453400-18461600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr19:18453400-18466400 Weak transcription Brain Substantia Nigra brain
40 chr19:18453400-18466400 Weak transcription Hela-S3 cervix
41 chr19:18453400-18468000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr19:18454200-18459800 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
43 chr19:18454400-18460200 Weak transcription K562 blood
44 chr19:18454400-18465600 Weak transcription Skeletal Muscle Male skeletal muscle
45 chr19:18455200-18460200 Weak transcription GM12878-XiMat blood
46 chr19:18455200-18464000 Weak transcription Stomach Smooth Muscle stomach
47 chr19:18455200-18464400 Weak transcription Placenta Placenta
48 chr19:18455200-18466600 Weak transcription Lung lung
49 chr19:18455400-18459200 Weak transcription Brain Hippocampus Middle brain
50 chr19:18455400-18466400 Weak transcription Adipose Nuclei Adipose

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