Variant report

Variant rs11880757
Chromosome Location chr19:39375632-39375633
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:39360800-39379200 Weak transcription NHDF-Ad bronchial
2 chr19:39361000-39379000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
3 chr19:39361000-39380200 Weak transcription Psoas Muscle Psoas
4 chr19:39361200-39376800 Weak transcription Muscle Satellite Cultured Cells --
5 chr19:39365400-39379400 Weak transcription Osteobl bone
6 chr19:39368800-39376600 Weak transcription Rectal Smooth Muscle rectum
7 chr19:39368800-39378200 Genic enhancers Fetal Muscle Leg muscle
8 chr19:39368800-39386400 Genic enhancers Fetal Muscle Trunk muscle
9 chr19:39369000-39379200 Weak transcription HMEC breast
10 chr19:39369000-39384000 Weak transcription Right Atrium heart
11 chr19:39369000-39386400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
12 chr19:39369200-39376600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr19:39369200-39377800 Weak transcription Fetal Lung lung
14 chr19:39369200-39382800 Weak transcription H9 Cell Line embryonic stem cell
15 chr19:39369200-39389200 Weak transcription A549 lung
16 chr19:39369400-39376000 Strong transcription Fetal Adrenal Gland Adrenal Gland
17 chr19:39369400-39379200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr19:39369400-39382800 Weak transcription HUES6 Cell Line embryonic stem cell
19 chr19:39369400-39388800 Weak transcription Stomach Mucosa stomach
20 chr19:39369600-39378600 Weak transcription HUVEC blood vessel
21 chr19:39369600-39379600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr19:39369800-39375800 Strong transcription Gastric stomach
23 chr19:39369800-39375800 Strong transcription Skeletal Muscle Female skeletal muscle
24 chr19:39370000-39379000 Weak transcription Rectal Mucosa Donor 31 rectum
25 chr19:39370000-39385800 Strong transcription Fetal Stomach stomach
26 chr19:39370200-39376400 Weak transcription NHEK skin
27 chr19:39370200-39376600 Weak transcription Primary T cells from cord blood blood
28 chr19:39370200-39378800 Weak transcription Fetal Thymus thymus
29 chr19:39370200-39379200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
30 chr19:39370200-39379400 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
31 chr19:39370400-39378000 Weak transcription Small Intestine intestine
32 chr19:39370400-39379200 Weak transcription Duodenum Mucosa Duodenum
33 chr19:39371200-39379400 Weak transcription HepG2 liver
34 chr19:39371400-39377800 Weak transcription Primary T killer naive cells fromperipheralblood blood
35 chr19:39371400-39378000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
36 chr19:39371400-39379200 Weak transcription Primary B cells from cord blood blood
37 chr19:39371400-39379200 Weak transcription Primary T helper naive cells from peripheral blood blood
38 chr19:39371600-39377800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
39 chr19:39371600-39379000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr19:39371600-39379200 Weak transcription Colonic Mucosa Colon
41 chr19:39371600-39389800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
42 chr19:39371800-39379200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
43 chr19:39372000-39379400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
44 chr19:39372200-39376600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr19:39372200-39377800 Weak transcription Primary T killer memory cells from peripheral blood blood
46 chr19:39372200-39378000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
47 chr19:39372200-39378800 Weak transcription Sigmoid Colon Sigmoid Colon
48 chr19:39372200-39379200 Weak transcription NHLF lung
49 chr19:39372200-39381000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
50 chr19:39372400-39376600 Weak transcription HSMMtube muscle

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