Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs1188175	0.95[ASN][1000 genomes]
rs1188176	0.95[ASN][1000 genomes]
rs1188179	0.95[ASN][1000 genomes]
rs1188180	0.95[ASN][1000 genomes]
rs1188181	0.95[ASN][1000 genomes]
rs1188188	0.85[EUR][1000 genomes]
rs1188194	0.87[EUR][1000 genomes]
rs1188196	0.88[EUR][1000 genomes]
rs1188198	0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1188199	0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1188200	0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1188203	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1188206	0.95[AFR][1000 genomes];0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1201387	0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1203011	0.80[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1211177	0.89[CEU][hapmap];0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1211455	0.86[EUR][1000 genomes]
rs1212200	0.86[EUR][1000 genomes]
rs1212974	0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1480657	0.80[EUR][1000 genomes]
rs1480658	0.82[EUR][1000 genomes]
rs1480659	0.82[EUR][1000 genomes]
rs1623669	0.82[EUR][1000 genomes]
rs60269373	0.84[EUR][1000 genomes]
rs922655	0.87[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv901977	chr14:56213392-56492996	Enhancers Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	esv34106	chr14:56346245-56550642	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:56466400-56471000	Weak transcription	iPS-15b Cell Line	embryonic stem cell

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