The 2.0 version of rSNPBase

Variant report

Variant rs11889567
Chromosome Location chr2:113427582-113427583
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:113411200-113428200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr2:113418800-113428600 Weak transcription Brain Substantia Nigra brain
3 chr2:113419600-113431200 Weak transcription Aorta Aorta
4 chr2:113420800-113431200 Weak transcription Primary B cells from cord blood blood
5 chr2:113421200-113431400 Weak transcription Primary hematopoietic stem cells blood
6 chr2:113421400-113448400 Weak transcription ES-I3 Cell Line embryonic stem cell
7 chr2:113421600-113429400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr2:113421600-113429400 Weak transcription iPS-15b Cell Line embryonic stem cell
9 chr2:113421600-113438400 Weak transcription Psoas Muscle Psoas
10 chr2:113422200-113432000 Weak transcription Left Ventricle heart
11 chr2:113422600-113429400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr2:113422600-113431600 Weak transcription Primary B cells from peripheral blood blood
13 chr2:113422600-113432000 Weak transcription Fetal Muscle Leg muscle
14 chr2:113422800-113428000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr2:113422800-113431400 Weak transcription Skeletal Muscle Female skeletal muscle
16 chr2:113422800-113437000 Weak transcription HMEC breast
17 chr2:113422800-113438200 Weak transcription Brain Cingulate Gyrus brain
18 chr2:113423000-113428000 Weak transcription Primary neutrophils fromperipheralblood blood
19 chr2:113423000-113429200 Weak transcription HUES48 Cell Line embryonic stem cell
20 chr2:113423000-113429800 Weak transcription NHEK skin
21 chr2:113423000-113430000 Weak transcription NHDF-Ad bronchial
22 chr2:113423000-113430800 Weak transcription Fetal Brain Female brain
23 chr2:113423200-113428000 Weak transcription Sigmoid Colon Sigmoid Colon
24 chr2:113423200-113428600 Weak transcription HUES64 Cell Line embryonic stem cell
25 chr2:113423200-113428600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr2:113423200-113429200 Weak transcription HUES6 Cell Line embryonic stem cell
27 chr2:113423200-113429200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
28 chr2:113423200-113429400 Weak transcription H1 Cell Line embryonic stem cell
29 chr2:113423200-113429400 Weak transcription Brain Germinal Matrix brain
30 chr2:113423200-113431400 Weak transcription Adipose Nuclei Adipose
31 chr2:113423200-113431400 Weak transcription Duodenum Mucosa Duodenum
32 chr2:113423200-113431400 Weak transcription Spleen Spleen
33 chr2:113423200-113432200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr2:113423200-113432200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr2:113423200-113432400 Weak transcription Skeletal Muscle Male skeletal muscle
36 chr2:113423200-113437000 Weak transcription Lung lung
37 chr2:113423200-113445000 Weak transcription Fetal Brain Male brain
38 chr2:113423400-113427800 Weak transcription Rectal Mucosa Donor 31 rectum
39 chr2:113423400-113427800 Weak transcription Stomach Smooth Muscle stomach
40 chr2:113423400-113428200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr2:113423400-113428200 Weak transcription Duodenum Smooth Muscle Duodenum
42 chr2:113423400-113428600 Weak transcription Cortex derived primary cultured neurospheres brain
43 chr2:113423400-113429200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr2:113423400-113429200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
45 chr2:113423400-113429400 Weak transcription iPS-18 Cell Line embryonic stem cell
46 chr2:113423400-113430000 Weak transcription Thymus Thymus
47 chr2:113423400-113432000 Weak transcription Fetal Adrenal Gland Adrenal Gland
48 chr2:113423400-113437000 Weak transcription Muscle Satellite Cultured Cells --
49 chr2:113423400-113448400 Weak transcription Brain Inferior Temporal Lobe brain
50 chr2:113423600-113427600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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Last update: Aug 31, 2015