The 2.0 version of rSNPBase

Variant report

Variant rs11890082
Chromosome Location chr2:144481277-144481278
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:144455800-144487000 Weak transcription Spleen Spleen
2 chr2:144469000-144482800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
3 chr2:144469400-144484400 Strong transcription Primary B cells from peripheral blood blood
4 chr2:144470000-144483000 Weak transcription Primary T helper naive cells from peripheral blood blood
5 chr2:144470200-144486200 Strong transcription Primary T cells from cord blood blood
6 chr2:144470200-144487800 Weak transcription Primary monocytes fromperipheralblood blood
7 chr2:144470200-144523200 Weak transcription Primary T helper naive cells fromperipheralblood blood
8 chr2:144470200-144525400 Weak transcription Primary T killer naive cells fromperipheralblood blood
9 chr2:144470600-144486200 Weak transcription Primary neutrophils fromperipheralblood blood
10 chr2:144472200-144485200 Strong transcription Primary B cells from cord blood blood
11 chr2:144475200-144484200 Weak transcription Primary hematopoietic stem cells short term culture blood
12 chr2:144475200-144485600 Weak transcription Primary T killer memory cells from peripheral blood blood
13 chr2:144475400-144487000 Weak transcription GM12878-XiMat blood
14 chr2:144475800-144481400 Weak transcription Thymus Thymus
15 chr2:144476000-144487800 Weak transcription Rectal Mucosa Donor 29 rectum
16 chr2:144476600-144483200 Weak transcription Fetal Brain Male brain
17 chr2:144477200-144483600 Weak transcription Primary T helper cells PMA-I stimulated --
18 chr2:144477200-144485600 Weak transcription Primary hematopoietic stem cells blood
19 chr2:144477200-144525200 Weak transcription Fetal Thymus thymus
20 chr2:144477600-144494200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
21 chr2:144478000-144486200 Weak transcription ES-I3 Cell Line embryonic stem cell
22 chr2:144478000-144490600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
23 chr2:144478600-144499800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
24 chr2:144478800-144483800 Weak transcription Primary T regulatory cells fromperipheralblood blood
25 chr2:144480000-144481800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr2:144480000-144485600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr2:144480200-144484200 Enhancers Stomach Mucosa stomach
28 chr2:144480400-144486600 Weak transcription Fetal Lung lung
29 chr2:144480600-144481800 Strong transcription Dnd41 blood
30 chr2:144480600-144482200 Strong transcription Primary T helper cells fromperipheralblood blood
31 chr2:144480600-144485600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr2:144480600-144485600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr2:144480800-144481400 Enhancers Gastric stomach
34 chr2:144480800-144482000 Strong transcription Primary T helper 17 cells PMA-I stimulated --
35 chr2:144480800-144482800 Weak transcription Fetal Intestine Small intestine
36 chr2:144481000-144482000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
37 chr2:144481000-144485600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr2:144481000-144485600 Weak transcription NHEK skin
39 chr2:144481000-144485800 Weak transcription Monocytes-CD14+_RO01746 blood
40 chr2:144481200-144483600 Weak transcription Primary T cells fromperipheralblood blood
41 chr2:144481200-144488000 Weak transcription Placenta Amnion Placenta Amnion

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Last update: Aug 31, 2015