The 2.0 version of rSNPBase

Variant report

Variant rs11890760
Chromosome Location chr2:72972477-72972478
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:72905800-72984400 Weak transcription Aorta Aorta
2 chr2:72922400-72976200 Weak transcription Psoas Muscle Psoas
3 chr2:72923000-72972800 Weak transcription Brain Inferior Temporal Lobe brain
4 chr2:72923000-73008600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr2:72937200-72974200 Weak transcription Brain Hippocampus Middle brain
6 chr2:72937800-72978400 Weak transcription Brain Germinal Matrix brain
7 chr2:72938200-72987800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr2:72943600-72978800 Weak transcription Primary T cells from cord blood blood
9 chr2:72945600-72977800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
10 chr2:72946400-72974600 Weak transcription Brain Substantia Nigra brain
11 chr2:72946600-72972800 Weak transcription Skeletal Muscle Male skeletal muscle
12 chr2:72946800-72980200 Weak transcription Left Ventricle heart
13 chr2:72950000-72982400 Weak transcription Colon Smooth Muscle Colon
14 chr2:72950400-72972600 Weak transcription Brain Angular Gyrus brain
15 chr2:72951200-72974600 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr2:72951600-72972600 Weak transcription HUES64 Cell Line embryonic stem cell
17 chr2:72952200-72972800 Weak transcription Duodenum Mucosa Duodenum
18 chr2:72952800-72975000 Weak transcription Ovary ovary
19 chr2:72956000-72972800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
20 chr2:72958600-72975400 Weak transcription Brain Anterior Caudate brain
21 chr2:72961200-72976400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
22 chr2:72962600-72972800 Weak transcription HUVEC blood vessel
23 chr2:72966200-72975600 Weak transcription iPS-18 Cell Line embryonic stem cell
24 chr2:72968600-72980000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr2:72968800-72975800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr2:72969600-72975600 Weak transcription HUES48 Cell Line embryonic stem cell
27 chr2:72970800-72973000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr2:72970800-72973000 Enhancers NHEK skin
29 chr2:72970800-72973200 Enhancers Fetal Heart heart
30 chr2:72971200-72972600 Enhancers A549 lung
31 chr2:72971200-72973400 Enhancers Brain Cingulate Gyrus brain
32 chr2:72971200-72976000 Weak transcription iPS-15b Cell Line embryonic stem cell
33 chr2:72971200-72977200 Weak transcription Stomach Mucosa stomach
34 chr2:72971600-72972600 Weak transcription Muscle Satellite Cultured Cells --
35 chr2:72971600-72972800 Weak transcription HepG2 liver
36 chr2:72971600-72974400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr2:72971800-72972600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr2:72971800-72972800 Weak transcription NHDF-Ad bronchial
39 chr2:72971800-72974600 Weak transcription Fetal Lung lung
40 chr2:72971800-72982800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr2:72972000-72973000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr2:72972000-72973200 Enhancers Pancreatic Islets Pancreatic Islet
43 chr2:72972200-72973000 Enhancers Fetal Adrenal Gland Adrenal Gland
44 chr2:72972200-72980400 Weak transcription Right Ventricle heart
45 chr2:72972400-72973000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr2:72972400-72973000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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Last update: Aug 31, 2015