The 2.0 version of rSNPBase

Variant report

Variant rs11896293
Chromosome Location chr2:73800058-73800059
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:73731800-73807600 Weak transcription Hela-S3 cervix
2 chr2:73758200-73800200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
3 chr2:73759600-73828000 Weak transcription Pancreas Pancrea
4 chr2:73760600-73828000 Weak transcription Right Ventricle heart
5 chr2:73764600-73806800 Weak transcription Primary T helper cells fromperipheralblood blood
6 chr2:73764600-73807200 Weak transcription Primary T helper naive cells fromperipheralblood blood
7 chr2:73765200-73807800 Weak transcription Brain Anterior Caudate brain
8 chr2:73765400-73808400 Weak transcription HepG2 liver
9 chr2:73765800-73815400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
10 chr2:73765800-73837800 Weak transcription Fetal Brain Male brain
11 chr2:73766000-73807400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
12 chr2:73766400-73803200 Weak transcription Fetal Intestine Large intestine
13 chr2:73769200-73802800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
14 chr2:73775600-73811400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr2:73776000-73801200 Weak transcription GM12878-XiMat blood
16 chr2:73776000-73821600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr2:73776400-73807800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
18 chr2:73778600-73811400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
19 chr2:73778800-73806200 Weak transcription Fetal Intestine Small intestine
20 chr2:73782200-73811400 Weak transcription Skeletal Muscle Male skeletal muscle
21 chr2:73782600-73808000 Weak transcription Primary T helper naive cells from peripheral blood blood
22 chr2:73784200-73808200 Weak transcription Primary B cells from peripheral blood blood
23 chr2:73785200-73815400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
24 chr2:73785400-73838200 Weak transcription Psoas Muscle Psoas
25 chr2:73786000-73800200 Weak transcription HMEC breast
26 chr2:73786200-73815400 Weak transcription Brain Inferior Temporal Lobe brain
27 chr2:73786400-73800400 Weak transcription Brain Substantia Nigra brain
28 chr2:73786600-73800200 Weak transcription Colon Smooth Muscle Colon
29 chr2:73787400-73809800 Weak transcription Rectal Mucosa Donor 29 rectum
30 chr2:73787800-73802200 Weak transcription HUES6 Cell Line embryonic stem cell
31 chr2:73787800-73807200 Weak transcription Primary T helper cells PMA-I stimulated --
32 chr2:73788000-73807000 Weak transcription Skeletal Muscle Female skeletal muscle
33 chr2:73788200-73802200 Weak transcription Primary T killer naive cells fromperipheralblood blood
34 chr2:73788200-73815200 Weak transcription Brain Angular Gyrus brain
35 chr2:73789600-73800200 Weak transcription Fetal Lung lung
36 chr2:73792200-73828600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
37 chr2:73792400-73801400 Weak transcription ES-I3 Cell Line embryonic stem cell
38 chr2:73792600-73820800 Weak transcription HSMMtube muscle
39 chr2:73793800-73807800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
40 chr2:73797400-73828400 Weak transcription Rectal Mucosa Donor 31 rectum
41 chr2:73798400-73801400 Strong transcription Dnd41 blood
42 chr2:73798600-73800800 Strong transcription Breast Myoepithelial Primary Cells Breast
43 chr2:73798600-73801000 Weak transcription NHLF lung
44 chr2:73798600-73802600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr2:73798600-73808800 Weak transcription Rectal Smooth Muscle rectum
46 chr2:73798800-73801400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
47 chr2:73798800-73801600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
48 chr2:73799000-73800400 Strong transcription Duodenum Smooth Muscle Duodenum
49 chr2:73799000-73800600 Strong transcription Aorta Aorta
50 chr2:73799000-73800800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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Last update: Aug 31, 2015