Variant report

Variant	rs11897622
Chromosome Location	chr2:190818761-190818762
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs1011584	1.00[CEU][hapmap]
rs11901321	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16832252	1.00[EUR][1000 genomes]
rs16832255	1.00[EUR][1000 genomes]
rs4853635	1.00[CEU][hapmap]
rs6717677	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs7562253	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv875618	chr2:190789387-190883360	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:190816000-190818800	Enhancers	Primary B cells from peripheral blood	blood
2	chr2:190816400-190819000	Enhancers	Primary B cells from cord blood	blood
3	chr2:190817200-190818800	Weak transcription	A549	lung
4	chr2:190818000-190820000	Enhancers	GM12878-XiMat	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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