The 2.0 version of rSNPBase

Variant report

Variant rs11919057
Chromosome Location chr3:111634779-111634780
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:90 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:111620000-111643200 Weak transcription Esophagus oesophagus
2 chr3:111623400-111641200 Weak transcription Lung lung
3 chr3:111623800-111640200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
4 chr3:111624600-111643200 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr3:111628400-111641600 Weak transcription Spleen Spleen
6 chr3:111629400-111636200 Weak transcription Psoas Muscle Psoas
7 chr3:111629600-111642800 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr3:111629800-111642800 Weak transcription Stomach Mucosa stomach
9 chr3:111630200-111637400 Weak transcription Aorta Aorta
10 chr3:111630200-111641400 Weak transcription Primary hematopoietic stem cells short term culture blood
11 chr3:111630400-111634800 Weak transcription ES-WA7 Cell Line embryonic stem cell
12 chr3:111630600-111634800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr3:111630600-111634800 Weak transcription Small Intestine intestine
14 chr3:111630600-111635600 Weak transcription Skeletal Muscle Female skeletal muscle
15 chr3:111630600-111637000 Weak transcription Fetal Lung lung
16 chr3:111630600-111637600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
17 chr3:111630600-111642400 Weak transcription Skeletal Muscle Male skeletal muscle
18 chr3:111630600-111642800 Weak transcription Pancreas Pancrea
19 chr3:111630800-111637000 Weak transcription Primary T cells fromperipheralblood blood
20 chr3:111630800-111645000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
21 chr3:111631000-111637200 Weak transcription Fetal Intestine Large intestine
22 chr3:111631000-111639200 Weak transcription Fetal Brain Male brain
23 chr3:111631000-111672000 Weak transcription Fetal Intestine Small intestine
24 chr3:111631000-111673400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
25 chr3:111631600-111635000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr3:111631800-111635800 Strong transcription Osteobl bone
27 chr3:111631800-111636200 Strong transcription Liver Liver
28 chr3:111631800-111644800 Strong transcription Placenta Placenta
29 chr3:111632000-111642600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr3:111632000-111643400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
31 chr3:111632200-111634800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr3:111632200-111635000 Strong transcription Adipose Nuclei Adipose
33 chr3:111632200-111635200 Strong transcription Muscle Satellite Cultured Cells --
34 chr3:111632200-111647000 Weak transcription Rectal Mucosa Donor 29 rectum
35 chr3:111632400-111636000 Weak transcription HSMMtube muscle
36 chr3:111632400-111639200 Strong transcription Placenta Amnion Placenta Amnion
37 chr3:111632600-111635000 Strong transcription HSMM muscle
38 chr3:111632600-111635400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
39 chr3:111632600-111636200 Weak transcription Colon Smooth Muscle Colon
40 chr3:111632600-111637400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr3:111632600-111637600 Weak transcription Primary B cells from peripheral blood blood
42 chr3:111632800-111634800 Weak transcription iPS-18 Cell Line embryonic stem cell
43 chr3:111632800-111635200 Weak transcription Fetal Heart heart
44 chr3:111632800-111637000 Weak transcription Fetal Muscle Trunk muscle
45 chr3:111632800-111637400 Weak transcription Gastric stomach
46 chr3:111632800-111639200 Weak transcription Duodenum Mucosa Duodenum
47 chr3:111633000-111634800 Weak transcription H9 Cell Line embryonic stem cell
48 chr3:111633000-111634800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
49 chr3:111633000-111635600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
50 chr3:111633000-111635600 Weak transcription Rectal Smooth Muscle rectum

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Last update: Aug 31, 2015