Variant report

Variant rs11922063
Chromosome Location chr3:143255258-143255259
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:143223000-143256200 Weak transcription Esophagus oesophagus
2 chr3:143245200-143255600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr3:143245400-143255600 Weak transcription Brain Cingulate Gyrus brain
4 chr3:143245600-143255800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr3:143246800-143255400 Weak transcription HSMM muscle
6 chr3:143248000-143255600 Weak transcription Brain Substantia Nigra brain
7 chr3:143248200-143255800 Weak transcription Aorta Aorta
8 chr3:143248400-143261000 Weak transcription Primary monocytes fromperipheralblood blood
9 chr3:143248400-143263800 Weak transcription Primary T cells from cord blood blood
10 chr3:143248400-143276800 Weak transcription Primary T helper naive cells fromperipheralblood blood
11 chr3:143249000-143256200 Weak transcription Lung lung
12 chr3:143250200-143269600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
13 chr3:143252200-143255400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr3:143252200-143255600 Weak transcription Fetal Muscle Trunk muscle
15 chr3:143252200-143269400 Weak transcription Placenta Placenta
16 chr3:143253200-143256000 Enhancers Fetal Lung lung
17 chr3:143253400-143255800 Weak transcription Spleen Spleen
18 chr3:143254600-143256400 Enhancers Primary B cells from cord blood blood
19 chr3:143254600-143256400 Enhancers Stomach Mucosa stomach
20 chr3:143254800-143255600 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr3:143254800-143257600 Enhancers Dnd41 blood
22 chr3:143254800-143258400 Enhancers NHLF lung
23 chr3:143255000-143255400 Flanking Active TSS Primary B cells from peripheral blood blood
24 chr3:143255000-143255400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr3:143255000-143255400 Flanking Active TSS Duodenum Mucosa Duodenum
26 chr3:143255000-143255600 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr3:143255000-143255600 Flanking Active TSS Adipose Nuclei Adipose
28 chr3:143255000-143255800 Enhancers Fetal Intestine Small intestine
29 chr3:143255000-143255800 Enhancers Sigmoid Colon Sigmoid Colon
30 chr3:143255000-143256000 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr3:143255000-143256000 Flanking Active TSS Muscle Satellite Cultured Cells --
32 chr3:143255000-143256000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
33 chr3:143255000-143256000 Flanking Active TSS GM12878-XiMat blood
34 chr3:143255000-143256400 Enhancers Small Intestine intestine
35 chr3:143255000-143256800 Enhancers Fetal Muscle Leg muscle
36 chr3:143255000-143256800 Enhancers Fetal Thymus thymus
37 chr3:143255000-143257000 Enhancers Ovary ovary
38 chr3:143255000-143258400 Enhancers Colon Smooth Muscle Colon
39 chr3:143255000-143258400 Enhancers Duodenum Smooth Muscle Duodenum
40 chr3:143255000-143258400 Enhancers Fetal Stomach stomach
41 chr3:143255200-143255400 Enhancers NHDF-Ad bronchial
42 chr3:143255200-143255600 Active TSS Rectal Mucosa Donor 29 rectum
43 chr3:143255200-143255800 Enhancers Primary T regulatory cells fromperipheralblood blood
44 chr3:143255200-143256000 Flanking Active TSS Osteobl bone
45 chr3:143255200-143256400 Enhancers HSMMtube muscle
46 chr3:143255200-143257400 Weak transcription Colonic Mucosa Colon
47 chr3:143255200-143257600 Enhancers Breast Myoepithelial Primary Cells Breast
48 chr3:143255200-143257600 Weak transcription Fetal Kidney kidney

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