The 2.0 version of rSNPBase

Variant report

Variant rs11926825
Chromosome Location chr3:17057094-17057095
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:17050200-17059200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr3:17050800-17060200 Strong transcription Primary hematopoietic stem cells blood
3 chr3:17050800-17061000 Strong transcription Primary B cells from cord blood blood
4 chr3:17051000-17060000 Strong transcription Primary B cells from peripheral blood blood
5 chr3:17051200-17060000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
6 chr3:17051200-17060200 Strong transcription Primary monocytes fromperipheralblood blood
7 chr3:17051200-17060800 Strong transcription Monocytes-CD14+_RO01746 blood
8 chr3:17051400-17058600 Strong transcription Primary neutrophils fromperipheralblood blood
9 chr3:17051600-17063000 Weak transcription HUVEC blood vessel
10 chr3:17051600-17075000 Weak transcription Fetal Brain Male brain
11 chr3:17053200-17062800 Weak transcription Primary T killer naive cells fromperipheralblood blood
12 chr3:17053200-17069000 Weak transcription Aorta Aorta
13 chr3:17053200-17069000 Weak transcription Fetal Lung lung
14 chr3:17053400-17059600 Weak transcription Fetal Thymus thymus
15 chr3:17053400-17072600 Weak transcription Ovary ovary
16 chr3:17053600-17058000 Enhancers Fetal Intestine Large intestine
17 chr3:17053600-17059400 Weak transcription iPS-18 Cell Line embryonic stem cell
18 chr3:17053600-17059400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr3:17053600-17062800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
20 chr3:17053600-17064400 Weak transcription Spleen Spleen
21 chr3:17053600-17071000 Weak transcription Sigmoid Colon Sigmoid Colon
22 chr3:17053600-17076200 Weak transcription Rectal Mucosa Donor 31 rectum
23 chr3:17053600-17080600 Weak transcription Fetal Muscle Leg muscle
24 chr3:17053800-17068400 Weak transcription Adipose Nuclei Adipose
25 chr3:17053800-17086800 Weak transcription Fetal Stomach stomach
26 chr3:17054000-17058600 Enhancers Fetal Heart heart
27 chr3:17054600-17057400 Enhancers Stomach Mucosa stomach
28 chr3:17054600-17058200 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
29 chr3:17055000-17059200 Strong transcription Primary T helper cells PMA-I stimulated --
30 chr3:17055000-17060000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
31 chr3:17055000-17066200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
32 chr3:17055000-17077000 Weak transcription Fetal Brain Female brain
33 chr3:17055200-17072000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
34 chr3:17055400-17057400 Enhancers Fetal Intestine Small intestine
35 chr3:17055400-17057600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
36 chr3:17055400-17058000 Weak transcription Psoas Muscle Psoas
37 chr3:17055400-17059000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
38 chr3:17055400-17070600 Weak transcription Gastric stomach
39 chr3:17055400-17074200 Weak transcription Brain Anterior Caudate brain
40 chr3:17055400-17088800 Weak transcription Thymus Thymus
41 chr3:17055600-17057600 Active TSS Duodenum Mucosa Duodenum
42 chr3:17055600-17058000 Weak transcription Right Ventricle heart
43 chr3:17055600-17058000 Weak transcription Skeletal Muscle Male skeletal muscle
44 chr3:17055600-17059600 Weak transcription HUES48 Cell Line embryonic stem cell
45 chr3:17055600-17059600 Weak transcription HUES6 Cell Line embryonic stem cell
46 chr3:17055600-17059600 Weak transcription HUES64 Cell Line embryonic stem cell
47 chr3:17055600-17060000 Strong transcription Primary T helper cells fromperipheralblood blood
48 chr3:17055600-17079800 Weak transcription Small Intestine intestine
49 chr3:17055800-17058400 Strong transcription Primary T regulatory cells fromperipheralblood blood
50 chr3:17055800-17059400 Weak transcription iPS-20b Cell Line embryonic stem cell

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015