Variant report

Variant	rs11939032
Chromosome Location	chr4:160291950-160291951
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs16999163	1.00[AMR][1000 genomes]
rs35898385	0.84[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1022771	chr4:160188801-160324683	Weak transcription ZNF genes & repeats Enhancers Strong transcription Genic enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:160275200-160303800	Weak transcription	Right Atrium	heart
2	chr4:160280200-160295200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
3	chr4:160281200-160292000	Weak transcription	Brain Germinal Matrix	brain
4	chr4:160289000-160295800	Weak transcription	Fetal Heart	heart
5	chr4:160290000-160293200	Weak transcription	Spleen	Spleen
6	chr4:160291000-160299000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr4:160291200-160299800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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