Variant report

Variant rs11939575
Chromosome Location chr4:187627792-187627793
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:93 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:187608000-187632400 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr4:187614800-187629400 Weak transcription Esophagus oesophagus
3 chr4:187615400-187628000 Weak transcription K562 blood
4 chr4:187620000-187628800 Weak transcription Small Intestine intestine
5 chr4:187621200-187628200 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
6 chr4:187622600-187634200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
7 chr4:187622800-187630400 Weak transcription Brain Cingulate Gyrus brain
8 chr4:187623000-187628000 Weak transcription Brain Hippocampus Middle brain
9 chr4:187623200-187631800 Weak transcription ES-WA7 Cell Line embryonic stem cell
10 chr4:187623200-187632000 Weak transcription Brain Inferior Temporal Lobe brain
11 chr4:187623400-187627800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
12 chr4:187623400-187628000 Weak transcription Placenta Amnion Placenta Amnion
13 chr4:187623400-187628000 Genic enhancers HepG2 liver
14 chr4:187623400-187628200 Weak transcription Gastric stomach
15 chr4:187623400-187630000 Weak transcription Right Atrium heart
16 chr4:187623400-187630200 Weak transcription Placenta Placenta
17 chr4:187623400-187632800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr4:187623600-187630200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr4:187623800-187629200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr4:187623800-187630000 Weak transcription Right Ventricle heart
21 chr4:187623800-187631600 Weak transcription Skeletal Muscle Male skeletal muscle
22 chr4:187624000-187632000 Weak transcription Brain Anterior Caudate brain
23 chr4:187624400-187627800 Weak transcription Fetal Kidney kidney
24 chr4:187624400-187630200 Weak transcription Brain Angular Gyrus brain
25 chr4:187624400-187631000 Strong transcription iPS-20b Cell Line embryonic stem cell
26 chr4:187624600-187628000 Weak transcription iPS-15b Cell Line embryonic stem cell
27 chr4:187624600-187629000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr4:187624800-187633800 Weak transcription Brain Substantia Nigra brain
29 chr4:187625000-187628000 Weak transcription Brain Germinal Matrix brain
30 chr4:187625000-187628000 Weak transcription Colonic Mucosa Colon
31 chr4:187625000-187628000 Weak transcription Ovary ovary
32 chr4:187625000-187631800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
33 chr4:187625400-187627800 Weak transcription Adipose Nuclei Adipose
34 chr4:187625400-187631000 Strong transcription HMEC breast
35 chr4:187625800-187630800 Strong transcription HUES48 Cell Line embryonic stem cell
36 chr4:187625800-187631000 Strong transcription HUES64 Cell Line embryonic stem cell
37 chr4:187626000-187627800 Enhancers Aorta Aorta
38 chr4:187626000-187627800 Weak transcription Liver Liver
39 chr4:187626200-187627800 Enhancers Left Ventricle heart
40 chr4:187626200-187630000 Strong transcription Duodenum Mucosa Duodenum
41 chr4:187626200-187630000 Strong transcription Fetal Intestine Small intestine
42 chr4:187626200-187630200 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
43 chr4:187626200-187631000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
44 chr4:187626200-187631000 Strong transcription Fetal Intestine Large intestine
45 chr4:187626200-187631000 Strong transcription NH-A brain
46 chr4:187626400-187630800 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
47 chr4:187626400-187631000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
48 chr4:187626400-187631000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
49 chr4:187626400-187631000 Strong transcription Cortex derived primary cultured neurospheres brain
50 chr4:187626400-187631000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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