The 2.0 version of rSNPBase

Variant report

Variant rs11945332
Chromosome Location chr4:48381910-48381911
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:48355000-48412600 Weak transcription Aorta Aorta
2 chr4:48355800-48390600 Weak transcription Primary T killer memory cells from peripheral blood blood
3 chr4:48357200-48384600 Weak transcription Lung lung
4 chr4:48359200-48384400 Weak transcription Fetal Muscle Leg muscle
5 chr4:48361000-48384600 Weak transcription Fetal Stomach stomach
6 chr4:48362600-48384600 Weak transcription Left Ventricle heart
7 chr4:48363000-48384600 Weak transcription Ovary ovary
8 chr4:48363400-48405400 Weak transcription Right Ventricle heart
9 chr4:48363600-48382600 Weak transcription Fetal Brain Male brain
10 chr4:48363600-48382800 Weak transcription Skeletal Muscle Female skeletal muscle
11 chr4:48368600-48384600 Weak transcription Thymus Thymus
12 chr4:48368800-48384600 Weak transcription Fetal Muscle Trunk muscle
13 chr4:48369600-48382600 Weak transcription Skeletal Muscle Male skeletal muscle
14 chr4:48371400-48395400 Weak transcription Primary T helper naive cells from peripheral blood blood
15 chr4:48372000-48384200 Weak transcription Primary T helper naive cells fromperipheralblood blood
16 chr4:48372600-48387000 Weak transcription Primary T killer naive cells fromperipheralblood blood
17 chr4:48372600-48426800 Weak transcription Small Intestine intestine
18 chr4:48372800-48382000 Weak transcription GM12878-XiMat blood
19 chr4:48372800-48382600 Weak transcription Primary hematopoietic stem cells blood
20 chr4:48372800-48384600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
21 chr4:48373000-48384400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
22 chr4:48373000-48384800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
23 chr4:48374000-48382000 Weak transcription Primary B cells from peripheral blood blood
24 chr4:48374000-48383000 Weak transcription Fetal Thymus thymus
25 chr4:48374000-48384600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
26 chr4:48374000-48385600 Weak transcription Right Atrium heart
27 chr4:48374600-48382400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr4:48375400-48382200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr4:48375600-48382000 Weak transcription Primary neutrophils fromperipheralblood blood
30 chr4:48375800-48384600 Weak transcription K562 blood
31 chr4:48376200-48382000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
32 chr4:48377800-48384600 Weak transcription Pancreas Pancrea
33 chr4:48377800-48405000 Weak transcription Esophagus oesophagus
34 chr4:48377800-48423800 Weak transcription Placenta Amnion Placenta Amnion
35 chr4:48378000-48382400 Weak transcription ES-WA7 Cell Line embryonic stem cell
36 chr4:48378000-48384600 Weak transcription Fetal Kidney kidney
37 chr4:48378000-48384800 Weak transcription Colonic Mucosa Colon
38 chr4:48378000-48386400 Weak transcription Duodenum Smooth Muscle Duodenum
39 chr4:48378000-48390000 Weak transcription NHLF lung
40 chr4:48378000-48423800 Weak transcription Colon Smooth Muscle Colon
41 chr4:48378200-48382000 Weak transcription Primary hematopoietic stem cells short term culture blood
42 chr4:48378200-48382000 Weak transcription HMEC breast
43 chr4:48378200-48382000 Weak transcription HSMMtube muscle
44 chr4:48378200-48384600 Weak transcription NHDF-Ad bronchial
45 chr4:48378200-48386400 Weak transcription Hela-S3 cervix
46 chr4:48378200-48398400 Weak transcription A549 lung
47 chr4:48378400-48382400 Weak transcription H1 Cell Line embryonic stem cell
48 chr4:48378400-48382600 Weak transcription Fetal Intestine Large intestine
49 chr4:48378400-48382800 Weak transcription HUVEC blood vessel
50 chr4:48378400-48384600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung

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Last update: Aug 31, 2015