Variant report

Variant	rs11945371
Chromosome Location	chr4:56275230-56275231
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr4:56266974..56269917-chr4:56274406..56277195,2	MCF-7	breast:
2	chr4:56272858..56275843-chr4:56602241..56604494,2	K562	blood:
3	chr4:56274229..56276308-chr4:56282213..56284888,2	MCF-7	breast:
4	chr4:56212034..56214727-chr4:56273890..56277792,4	MCF-7	breast:
5	chr4:56269741..56272367-chr4:56273938..56276057,3	MCF-7	breast:
6	chr4:56211324..56213872-chr4:56274081..56277036,2	K562	blood:
7	chr4:56273385..56275386-chr4:56294557..56296512,2	K562	blood:

Variant related genes	Relation type
ENSG00000134851	Chromatin interaction
ENSG00000128039	Chromatin interaction

Extended variants
information (count: 118 )
Associated
traits (count: 13 )

rSNPs within LD-proxies of this variant (count:114)

rs_ID	r²[population]
rs10462032	0.95[CHB][hapmap];1.00[JPT][hapmap];0.88[YRI][hapmap]
rs1047354	1.00[ASW][hapmap];0.80[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.86[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.81[MKK][hapmap];0.93[TSI][hapmap];0.94[YRI][hapmap];0.81[ASN][1000 genomes]
rs10517344	0.90[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap]
rs10517346	0.80[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap]
rs1056545	1.00[ASW][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.86[GIH][hapmap];1.00[JPT][hapmap];0.91[LWK][hapmap];0.81[MKK][hapmap];0.92[TSI][hapmap];0.88[YRI][hapmap];0.80[ASN][1000 genomes]
rs1056547	1.00[ASW][hapmap];0.80[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.86[GIH][hapmap];1.00[JPT][hapmap];0.87[LWK][hapmap];0.93[TSI][hapmap];0.94[YRI][hapmap];0.80[ASN][1000 genomes]
rs10866425	1.00[ASW][hapmap];0.95[CHB][hapmap];0.97[CHD][hapmap];0.82[GIH][hapmap];1.00[JPT][hapmap];0.95[LWK][hapmap];0.82[TSI][hapmap];0.94[YRI][hapmap]
rs11133377	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.90[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs11133378	0.80[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap]
rs11133380	1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap]
rs11133385	0.80[CHB][hapmap];0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs11133386	0.83[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap]
rs11133388	1.00[ASW][hapmap];0.80[CEU][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];0.86[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.81[MKK][hapmap];0.93[TSI][hapmap];0.94[YRI][hapmap]
rs11133389	1.00[CEU][hapmap];0.93[YRI][hapmap];0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs11133391	1.00[ASW][hapmap];0.80[CEU][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];0.86[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.81[MKK][hapmap];0.93[TSI][hapmap];0.94[YRI][hapmap]
rs11133397	0.80[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap]
rs11133398	0.95[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap]
rs11133400	0.90[CEU][hapmap];0.93[YRI][hapmap]
rs11726198	0.80[CEU][hapmap];0.94[YRI][hapmap]
rs11732723	0.83[YRI][hapmap]
rs11932712	0.80[AFR][1000 genomes];0.84[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs11935823	0.95[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap]
rs11939580	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs11943206	1.00[ASW][hapmap];1.00[CEU][hapmap];0.95[CHB][hapmap];0.97[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];0.95[LWK][hapmap];0.91[MEX][hapmap];0.95[TSI][hapmap];0.94[YRI][hapmap]
rs11943456	0.83[YRI][hapmap]
rs12500686	0.95[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap]
rs12501636	0.95[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap]
rs12501746	0.80[AFR][1000 genomes];0.84[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12504300	0.86[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap]
rs12506788	0.80[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap]
rs12508367	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs12510275	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12510327	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs12510400	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap]
rs12510681	0.95[CHB][hapmap];1.00[JPT][hapmap];0.87[YRI][hapmap]
rs12512737	0.80[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12641881	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.87[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs12644948	0.80[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap]
rs12648271	0.83[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap]
rs12649507	1.00[ASW][hapmap];1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.91[MEX][hapmap];0.83[MKK][hapmap];1.00[TSI][hapmap];0.94[YRI][hapmap];0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs12651640	0.84[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap]
rs13108409	0.93[CHB][hapmap];1.00[JPT][hapmap];0.82[YRI][hapmap]
rs13108499	0.94[YRI][hapmap]
rs13113518	1.00[ASW][hapmap];0.80[CEU][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];0.86[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.81[MKK][hapmap];0.93[TSI][hapmap];0.94[YRI][hapmap]
rs13114841	0.80[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap]
rs13115570	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs13116035	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs13116194	0.95[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap]
rs13120134	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.90[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs13122619	1.00[ASW][hapmap];0.80[CEU][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];0.86[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.81[MKK][hapmap];0.93[TSI][hapmap];0.94[YRI][hapmap]
rs13124436	1.00[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap];0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs13125984	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs13128179	0.80[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs13128180	0.94[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs13132085	0.90[CHB][hapmap];0.90[CHD][hapmap];0.85[JPT][hapmap];0.86[MEX][hapmap];0.88[YRI][hapmap]
rs13132420	1.00[ASW][hapmap];1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.87[MEX][hapmap];0.83[MKK][hapmap];0.97[TSI][hapmap];0.94[YRI][hapmap]
rs13140173	1.00[CEU][hapmap];0.87[YRI][hapmap];0.82[AMR][1000 genomes]
rs13146987	0.95[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap]
rs13152173	0.80[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap]
rs1464490	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs1522112	1.00[ASW][hapmap];0.80[CEU][hapmap];0.82[CHB][hapmap];0.95[CHD][hapmap];0.84[GIH][hapmap];0.82[JPT][hapmap];1.00[LWK][hapmap];0.81[MKK][hapmap];0.90[TSI][hapmap];0.94[YRI][hapmap]
rs1522114	1.00[ASW][hapmap];1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.91[MEX][hapmap];0.83[MKK][hapmap];1.00[TSI][hapmap];0.94[YRI][hapmap];0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1554483	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap]
rs1586555	0.95[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap]
rs2035691	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap];0.82[AMR][1000 genomes]
rs2035692	0.82[AMR][1000 genomes]
rs2048564	1.00[ASW][hapmap];1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.98[MKK][hapmap];1.00[TSI][hapmap];0.94[YRI][hapmap];0.99[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2087319	0.90[CHB][hapmap];0.85[JPT][hapmap]
rs2171618	1.00[ASW][hapmap];1.00[CEU][hapmap];0.95[CHB][hapmap];0.97[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];0.95[LWK][hapmap];0.91[MEX][hapmap];0.83[MKK][hapmap];0.95[TSI][hapmap];0.94[YRI][hapmap]
rs2272073	1.00[ASW][hapmap];1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.91[MEX][hapmap];0.83[MKK][hapmap];1.00[TSI][hapmap];0.94[YRI][hapmap];0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs2279458	0.90[ASW][hapmap];0.84[CHB][hapmap];0.97[CHD][hapmap];0.82[GIH][hapmap];0.95[JPT][hapmap];0.83[LWK][hapmap];0.81[TSI][hapmap]
rs2412648	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.91[MEX][hapmap];0.83[MKK][hapmap];1.00[TSI][hapmap];0.94[YRI][hapmap];0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs3749474	1.00[ASW][hapmap];0.80[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.86[GIH][hapmap];1.00[JPT][hapmap];0.95[LWK][hapmap];0.81[MKK][hapmap];0.93[TSI][hapmap];0.94[YRI][hapmap]
rs3805148	0.80[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap]
rs3805150	0.80[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap]
rs3805151	1.00[ASW][hapmap];0.80[CEU][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];0.86[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.81[MKK][hapmap];0.93[TSI][hapmap];0.94[YRI][hapmap]
rs3805153	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs3805155	0.80[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];0.88[YRI][hapmap]
rs4340844	0.80[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap]
rs4507426	0.82[AMR][1000 genomes]
rs4864542	1.00[ASW][hapmap];0.80[CEU][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];0.86[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.93[TSI][hapmap];0.94[YRI][hapmap]
rs4864543	1.00[CEU][hapmap];0.90[CHB][hapmap];0.90[JPT][hapmap];0.84[YRI][hapmap];0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4864546	0.80[CEU][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];0.86[GIH][hapmap];1.00[JPT][hapmap];0.90[TSI][hapmap]
rs4864547	0.80[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap]
rs4864548	1.00[ASW][hapmap];0.80[CEU][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];0.86[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.81[MKK][hapmap];0.93[TSI][hapmap];0.94[YRI][hapmap]
rs4864996	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.82[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs4864997	0.80[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap]
rs4864999	0.95[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap]
rs4865001	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4865003	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs4865007	0.90[ASW][hapmap];0.80[CEU][hapmap];0.90[CHB][hapmap];1.00[CHD][hapmap];0.86[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.81[MKK][hapmap];0.93[TSI][hapmap];0.94[YRI][hapmap]
rs4865011	0.93[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap]
rs6822746	0.82[ASN][1000 genomes]
rs6825774	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs6828570	1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap];0.80[ASN][1000 genomes]
rs6830409	0.82[AMR][1000 genomes]
rs6843722	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap];0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs6843997	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs6849474	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap];0.82[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs6849883	0.86[AFR][1000 genomes];0.82[ASN][1000 genomes]
rs6858749	0.83[YRI][hapmap]
rs7654116	0.82[ASN][1000 genomes]
rs7658446	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs7660517	0.81[ASN][1000 genomes]
rs7660980	0.80[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.95[LWK][hapmap];0.94[YRI][hapmap]
rs7663650	0.83[CEU][hapmap];0.84[GIH][hapmap];0.82[MEX][hapmap]
rs7677085	0.84[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap]
rs7677952	0.81[ASN][1000 genomes]
rs7686261	0.80[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap]
rs7691799	1.00[ASW][hapmap];0.80[CEU][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];0.86[GIH][hapmap];1.00[JPT][hapmap];0.95[LWK][hapmap];0.81[MKK][hapmap];0.93[TSI][hapmap];0.94[YRI][hapmap]
rs7696832	0.80[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap]
rs7699867	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs9312661	1.00[ASW][hapmap];0.80[CEU][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];0.86[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.81[MKK][hapmap];0.93[TSI][hapmap];0.94[YRI][hapmap]
rs939823	0.80[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3328582	chr4:56164136-56486156	Enhancers Active TSS Weak transcription Genic enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	30 gene(s)	inside rSNPs	diseases
2	nsv999477	chr4:56219035-56397180	Enhancers Strong transcription Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
3	nsv537101	chr4:56219035-56397180	Weak transcription Strong transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Genic enhancers ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
4	nsv1011722	chr4:56261349-56325600	Weak transcription Enhancers Strong transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases

mRNA abundance (count:13)

SNP	Gene	Cis/trans	Tissue	Source
rs11945371	SRD5A3-AS1	cis	Thyroid	GTEx
rs11945371	SRD5A3	cis	Esophagus Mucosa	GTEx
rs11945371	SRD5A3	cis	parietal	SCAN
rs11945371	TMEM165	cis	Nerve Tibial	GTEx
rs11945371	SRD5A3	cis	Thyroid	GTEx
rs11945371	SRD5A3	cis	Whole Blood	GTEx
rs11945371	SRD5A3-AS1	cis	Whole Blood	GTEx
rs11945371	TMEM165	cis	cerebellum	SCAN
rs11945371	SRD5A3	cis	lung	GTEx
rs11945371	PPAT	cis	cerebellum	SCAN
rs11945371	SRD5A2L	cis	multi-tissue	Pritchard
rs11945371	TMEM165	cis	parietal	SCAN
rs11945371	SRD5A3-AS1	cis	Esophagus Mucosa	GTEx

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:56264800-56282200	Weak transcription	Placenta Amnion	Placenta Amnion
2	chr4:56264800-56292200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
3	chr4:56265600-56275600	Weak transcription	Skeletal Muscle Male	skeletal muscle
4	chr4:56265600-56281600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
5	chr4:56265600-56283800	Weak transcription	Fetal Brain Male	brain
6	chr4:56265600-56286000	Weak transcription	Colonic Mucosa	Colon
7	chr4:56265600-56289800	Weak transcription	Pancreatic Islets	Pancreatic Islet
8	chr4:56265600-56319800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
9	chr4:56265800-56281200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
10	chr4:56266000-56283200	Weak transcription	Rectal Smooth Muscle	rectum
11	chr4:56266200-56275600	Weak transcription	Right Ventricle	heart
12	chr4:56267400-56280800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
13	chr4:56267400-56282800	Weak transcription	Small Intestine	intestine
14	chr4:56267400-56283200	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
15	chr4:56267600-56275800	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
16	chr4:56267600-56280800	Weak transcription	A549	lung
17	chr4:56268800-56326000	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
18	chr4:56269000-56311400	Strong transcription	Monocytes-CD14+_RO01746	blood
19	chr4:56270000-56281000	Weak transcription	Fetal Kidney	kidney
20	chr4:56270200-56281000	Weak transcription	Duodenum Smooth Muscle	Duodenum
21	chr4:56270200-56281600	Weak transcription	H9 Cell Line	embryonic stem cell
22	chr4:56270200-56282800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
23	chr4:56270400-56277400	Weak transcription	Hela-S3	cervix
24	chr4:56270400-56286400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
25	chr4:56271200-56275400	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
26	chr4:56271800-56277800	Weak transcription	Cortex derived primary cultured neurospheres	brain
27	chr4:56272400-56275600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
28	chr4:56272400-56275800	Weak transcription	Colon Smooth Muscle	Colon
29	chr4:56272400-56276000	Weak transcription	Skeletal Muscle Female	skeletal muscle
30	chr4:56272400-56278000	Weak transcription	Esophagus	oesophagus
31	chr4:56272400-56281000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
32	chr4:56272600-56277800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
33	chr4:56272600-56282800	Weak transcription	Primary hematopoietic stem cells	blood
34	chr4:56272800-56275600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
35	chr4:56273000-56275800	Weak transcription	Primary T cells from cord blood	blood
36	chr4:56273200-56275400	Genic enhancers	Brain Hippocampus Middle	brain
37	chr4:56273200-56275800	Weak transcription	Stomach Smooth Muscle	stomach
38	chr4:56273200-56279600	Weak transcription	Fetal Brain Female	brain
39	chr4:56273400-56277600	Weak transcription	HMEC	breast
40	chr4:56273400-56277800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
41	chr4:56273400-56283200	Weak transcription	Brain Germinal Matrix	brain
42	chr4:56273600-56275600	Weak transcription	Gastric	stomach
43	chr4:56273600-56275600	Weak transcription	Right Atrium	heart
44	chr4:56273600-56276200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
45	chr4:56273600-56277600	Weak transcription	Primary neutrophils fromperipheralblood	blood
46	chr4:56273600-56277800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
47	chr4:56273600-56277800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
48	chr4:56273600-56277800	Weak transcription	Fetal Intestine Small	intestine
49	chr4:56273600-56277800	Weak transcription	Fetal Stomach	stomach
50	chr4:56273600-56277800	Weak transcription	Lung	lung

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