Variant report

Variant	rs11948122
Chromosome Location	chr5:73977290-73977291
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	TBP	chr5:73977241-73977307	K562	blood:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr5:73973338..73977809-chr5:73979493..73982488,4	MCF-7	breast:
2	chr5:73973769..73978130-chr5:73979399..73982413,5	K562	blood:
3	chr5:73974217..73979066-chr5:73979317..73982643,5	K562	blood:

Variant related genes	Relation type
HEXB	TF binding region
ENSG00000049860	Chromatin interaction

rs_ID	r²[population]
rs11955177	1.00[AFR][1000 genomes]

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:73966800-73980200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr5:73966800-73980600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr5:73969800-73978800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr5:73969800-73980600	Weak transcription	HMEC	breast
5	chr5:73969800-73980600	Weak transcription	HSMM	muscle
6	chr5:73969800-73980800	Weak transcription	NHLF	lung
7	chr5:73971800-73980200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
8	chr5:73973400-73979400	Weak transcription	Placenta	Placenta
9	chr5:73973600-73978600	Weak transcription	NH-A	brain
10	chr5:73973800-73980600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
11	chr5:73975200-73977600	Weak transcription	Fetal Intestine Small	intestine
12	chr5:73975200-73980200	Weak transcription	Spleen	Spleen
13	chr5:73975400-73977600	Weak transcription	K562	blood
14	chr5:73976000-73980600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
15	chr5:73976200-73978800	Weak transcription	NHEK	skin
16	chr5:73976200-73980200	Weak transcription	H9 Cell Line	embryonic stem cell
17	chr5:73976200-73980600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
18	chr5:73976200-73980600	Weak transcription	Osteobl	bone
19	chr5:73976200-73981000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
20	chr5:73976400-73980000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
21	chr5:73976400-73980200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
22	chr5:73976400-73980200	Weak transcription	Hela-S3	cervix
23	chr5:73976800-73980600	Weak transcription	HUES48 Cell Line	embryonic stem cell
24	chr5:73977200-73977400	Enhancers	HSMMtube	muscle

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