Variant report

Variant rs11961233
Chromosome Location chr6:15375973-15375974
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:15341800-15378400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr6:15364600-15390200 Weak transcription HepG2 liver
3 chr6:15365000-15402800 Weak transcription Dnd41 blood
4 chr6:15365800-15378600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr6:15365800-15384800 Weak transcription Fetal Muscle Trunk muscle
6 chr6:15366400-15382600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr6:15366600-15376000 Weak transcription Osteobl bone
8 chr6:15366600-15377200 Weak transcription Stomach Mucosa stomach
9 chr6:15366600-15378600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr6:15366600-15384800 Weak transcription NH-A brain
11 chr6:15366600-15385000 Weak transcription Fetal Brain Female brain
12 chr6:15367000-15376200 Weak transcription Breast Myoepithelial Primary Cells Breast
13 chr6:15367000-15379200 Weak transcription Brain Germinal Matrix brain
14 chr6:15367000-15384800 Weak transcription ES-WA7 Cell Line embryonic stem cell
15 chr6:15367400-15384600 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr6:15367400-15389400 Weak transcription Ovary ovary
17 chr6:15367800-15376000 Weak transcription Liver Liver
18 chr6:15370200-15381600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
19 chr6:15370200-15381600 Weak transcription Rectal Mucosa Donor 29 rectum
20 chr6:15370400-15376600 Weak transcription Lung lung
21 chr6:15370400-15376800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
22 chr6:15370400-15376800 Weak transcription Esophagus oesophagus
23 chr6:15370400-15378800 Weak transcription Brain Cingulate Gyrus brain
24 chr6:15370400-15379400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
25 chr6:15370400-15383000 Weak transcription Spleen Spleen
26 chr6:15370400-15384800 Weak transcription Pancreas Pancrea
27 chr6:15371200-15384800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr6:15371400-15376600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr6:15371600-15382600 Weak transcription Cortex derived primary cultured neurospheres brain
30 chr6:15371800-15381800 Weak transcription Brain Angular Gyrus brain
31 chr6:15371800-15389000 Weak transcription Adipose Nuclei Adipose
32 chr6:15372000-15376400 Weak transcription Rectal Smooth Muscle rectum
33 chr6:15372000-15386600 Weak transcription Fetal Intestine Small intestine
34 chr6:15372200-15378600 Weak transcription Brain Inferior Temporal Lobe brain
35 chr6:15372200-15379200 Weak transcription Brain Anterior Caudate brain
36 chr6:15372400-15376600 Weak transcription Stomach Smooth Muscle stomach
37 chr6:15372400-15379400 Weak transcription Fetal Lung lung
38 chr6:15372800-15377600 Enhancers Skeletal Muscle Female skeletal muscle
39 chr6:15373600-15377600 Enhancers Skeletal Muscle Male skeletal muscle
40 chr6:15373800-15379200 Strong transcription Primary B cells from cord blood blood
41 chr6:15374000-15377400 Strong transcription Monocytes-CD14+_RO01746 blood
42 chr6:15374000-15380000 Weak transcription Pancreatic Islets Pancreatic Islet
43 chr6:15374200-15376000 Strong transcription Primary monocytes fromperipheralblood blood
44 chr6:15374200-15376000 Enhancers Right Atrium heart
45 chr6:15374200-15377200 Strong transcription Primary neutrophils fromperipheralblood blood
46 chr6:15374200-15377800 Strong transcription Thymus Thymus
47 chr6:15374200-15389200 Weak transcription HSMM muscle
48 chr6:15374400-15376000 Genic enhancers HUES48 Cell Line embryonic stem cell
49 chr6:15374400-15376400 Strong transcription iPS-18 Cell Line embryonic stem cell
50 chr6:15374400-15377200 Strong transcription Primary B cells from peripheral blood blood

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