The 2.0 version of rSNPBase

Variant report

Variant rs11964503
Chromosome Location chr6:13228321-13228322
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:13182000-13230000 Weak transcription Brain Angular Gyrus brain
2 chr6:13203200-13230200 Weak transcription Fetal Stomach stomach
3 chr6:13206400-13229800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr6:13206400-13230000 Weak transcription Brain Inferior Temporal Lobe brain
5 chr6:13208200-13239800 Weak transcription Brain Substantia Nigra brain
6 chr6:13208400-13230200 Weak transcription Brain Cingulate Gyrus brain
7 chr6:13212400-13229800 Weak transcription Right Ventricle heart
8 chr6:13213400-13230000 Weak transcription Fetal Brain Female brain
9 chr6:13217800-13230000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr6:13217800-13230000 Weak transcription Spleen Spleen
11 chr6:13217800-13242400 Weak transcription Pancreas Pancrea
12 chr6:13218200-13230200 Weak transcription Brain Hippocampus Middle brain
13 chr6:13218200-13235000 Weak transcription Adipose Nuclei Adipose
14 chr6:13218400-13241000 Weak transcription Duodenum Smooth Muscle Duodenum
15 chr6:13218600-13230000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
16 chr6:13218600-13234400 Weak transcription HSMM muscle
17 chr6:13218800-13229800 Weak transcription Primary hematopoietic stem cells blood
18 chr6:13218800-13230200 Weak transcription Fetal Adrenal Gland Adrenal Gland
19 chr6:13219000-13230000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr6:13219800-13229600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
21 chr6:13220400-13228400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr6:13221400-13228400 Weak transcription Brain Germinal Matrix brain
23 chr6:13221400-13230000 Weak transcription Brain Anterior Caudate brain
24 chr6:13223200-13232200 Weak transcription Lung lung
25 chr6:13224600-13231800 Weak transcription Fetal Heart heart
26 chr6:13227400-13232400 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
27 chr6:13227800-13233200 Strong transcription Left Ventricle heart
28 chr6:13227800-13235600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
29 chr6:13227800-13238600 Strong transcription Stomach Smooth Muscle stomach
30 chr6:13227800-13240000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr6:13227800-13244000 Strong transcription Primary hematopoietic stem cells short term culture blood
32 chr6:13228000-13236000 Weak transcription Fetal Brain Male brain
33 chr6:13228200-13228400 Strong transcription Aorta Aorta
34 chr6:13228200-13228800 Bivalent Enhancer Primary Natural Killer cells fromperipheralblood blood
35 chr6:13228200-13229800 Bivalent Enhancer Primary T cells fromperipheralblood blood
36 chr6:13228200-13230200 Enhancers Primary T cells from cord blood blood
37 chr6:13228200-13230200 Enhancers Fetal Intestine Large intestine
38 chr6:13228200-13230200 Enhancers Fetal Intestine Small intestine

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Last update: Aug 31, 2015