Variant report

Variant rs11968400
Chromosome Location chr6:31804729-31804730
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:31801400-31805000 Active TSS Pancreatic Islets Pancreatic Islet
2 chr6:31801600-31805000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
3 chr6:31801800-31805000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
4 chr6:31802000-31807000 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr6:31802200-31804800 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
6 chr6:31802200-31806400 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
7 chr6:31802600-31806400 Transcr. at gene 5' and 3' HUES6 Cell Line embryonic stem cell
8 chr6:31802800-31805000 Flanking Active TSS Primary T helper cells fromperipheralblood blood
9 chr6:31802800-31806400 Transcr. at gene 5' and 3' iPS-15b Cell Line embryonic stem cell
10 chr6:31802800-31807400 Transcr. at gene 5' and 3' iPS-20b Cell Line embryonic stem cell
11 chr6:31803000-31805000 Flanking Active TSS Primary B cells from cord blood blood
12 chr6:31803000-31807400 Transcr. at gene 5' and 3' K562 blood
13 chr6:31803000-31817200 Weak transcription ES-WA7 Cell Line embryonic stem cell
14 chr6:31803200-31805400 Flanking Active TSS Primary hematopoietic stem cells blood
15 chr6:31803400-31804800 Weak transcription Spleen Spleen
16 chr6:31803400-31805400 Transcr. at gene 5' and 3' Fetal Muscle Leg muscle
17 chr6:31803400-31806400 Transcr. at gene 5' and 3' H1 Cell Line embryonic stem cell
18 chr6:31803600-31804800 Flanking Active TSS Fetal Adrenal Gland Adrenal Gland
19 chr6:31803600-31804800 Flanking Active TSS Fetal Brain Female brain
20 chr6:31803600-31804800 Flanking Active TSS Fetal Heart heart
21 chr6:31803600-31805000 Flanking Active TSS Monocytes-CD14+_RO01746 blood
22 chr6:31803600-31805400 Transcr. at gene 5' and 3' ES-I3 Cell Line embryonic stem cell
23 chr6:31803600-31805400 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
24 chr6:31803600-31805400 Flanking Active TSS Brain Germinal Matrix brain
25 chr6:31803600-31806200 Transcr. at gene 5' and 3' hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr6:31803600-31807000 Transcr. at gene 5' and 3' HUES64 Cell Line embryonic stem cell
27 chr6:31803800-31804800 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
28 chr6:31803800-31804800 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
29 chr6:31803800-31804800 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
30 chr6:31803800-31804800 Flanking Active TSS Brain Hippocampus Middle brain
31 chr6:31803800-31804800 Flanking Active TSS Skeletal Muscle Female skeletal muscle
32 chr6:31803800-31805000 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
33 chr6:31803800-31805000 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
34 chr6:31803800-31805000 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
35 chr6:31803800-31805000 Flanking Active TSS Brain Anterior Caudate brain
36 chr6:31803800-31805200 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
37 chr6:31803800-31805200 Transcr. at gene 5' and 3' Fetal Stomach stomach
38 chr6:31803800-31805400 Transcr. at gene 5' and 3' Left Ventricle heart
39 chr6:31803800-31805600 Transcr. at gene 5' and 3' Fetal Muscle Trunk muscle
40 chr6:31803800-31805800 Transcr. at gene 5' and 3' H9 Derived Neuron Cultured Cells ES cell derived
41 chr6:31803800-31805800 Transcr. at gene 5' and 3' hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
42 chr6:31803800-31805800 Transcr. at gene 5' and 3' IMR90 fetal lung fibroblasts Cell Line lung
43 chr6:31803800-31805800 Transcr. at gene 5' and 3' Fetal Intestine Large intestine
44 chr6:31803800-31805800 Transcr. at gene 5' and 3' Fetal Intestine Small intestine
45 chr6:31803800-31805800 Transcr. at gene 5' and 3' NHEK skin
46 chr6:31803800-31806000 Transcr. at gene 5' and 3' H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr6:31803800-31806000 Transcr. at gene 5' and 3' ES-UCSF4 Cell Line embryonic stem cell
48 chr6:31803800-31806400 Transcr. at gene 5' and 3' H9 Cell Line embryonic stem cell
49 chr6:31803800-31806400 Transcr. at gene 5' and 3' Dnd41 blood
50 chr6:31803800-31806400 Transcr. at gene 5' and 3' Osteobl bone

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