Variant report

Variant	rs11968984
Chromosome Location	chr6:64162005-64162006
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs11969294	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1019831	chr6:63279677-64230736	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:64158000-64168200	Enhancers	HepG2	liver
2	chr6:64158400-64168400	Weak transcription	Rectal Smooth Muscle	rectum
3	chr6:64159200-64162600	Weak transcription	Hela-S3	cervix
4	chr6:64161200-64162200	Enhancers	Liver	Liver
5	chr6:64162000-64162400	Enhancers	Fetal Intestine Large	intestine
6	chr6:64162000-64162400	Enhancers	Stomach Mucosa	stomach
7	chr6:64162000-64162800	Active TSS	A549	lung

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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