The 2.0 version of rSNPBase

Variant report

Variant rs11969523
Chromosome Location chr6:12167357-12167358
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:12160800-12170800 Weak transcription ES-I3 Cell Line embryonic stem cell
2 chr6:12161400-12175800 Weak transcription Brain Substantia Nigra brain
3 chr6:12164000-12170600 Weak transcription Brain Anterior Caudate brain
4 chr6:12164000-12173200 Weak transcription NH-A brain
5 chr6:12164200-12169000 Weak transcription Primary T helper cells fromperipheralblood blood
6 chr6:12164200-12174200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr6:12164200-12174800 Weak transcription HMEC breast
8 chr6:12164400-12167400 Weak transcription Fetal Lung lung
9 chr6:12164400-12169000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
10 chr6:12164400-12169200 Weak transcription Primary T helper naive cells from peripheral blood blood
11 chr6:12164400-12169400 Weak transcription Primary T killer naive cells fromperipheralblood blood
12 chr6:12164400-12169600 Weak transcription Primary T killer memory cells from peripheral blood blood
13 chr6:12164400-12170400 Weak transcription iPS-15b Cell Line embryonic stem cell
14 chr6:12164400-12174800 Weak transcription NHEK skin
15 chr6:12164600-12167600 Weak transcription Left Ventricle heart
16 chr6:12164600-12167800 Weak transcription Brain Angular Gyrus brain
17 chr6:12164600-12168800 Weak transcription Primary T helper naive cells fromperipheralblood blood
18 chr6:12164600-12168800 Weak transcription Aorta Aorta
19 chr6:12164600-12169400 Weak transcription Primary T helper cells PMA-I stimulated --
20 chr6:12164600-12170400 Weak transcription H1 Cell Line embryonic stem cell
21 chr6:12164600-12170600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
22 chr6:12164600-12170600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr6:12164600-12170600 Weak transcription Brain Cingulate Gyrus brain
24 chr6:12164600-12170800 Weak transcription HUES6 Cell Line embryonic stem cell
25 chr6:12164600-12170800 Weak transcription Primary monocytes fromperipheralblood blood
26 chr6:12164600-12170800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
27 chr6:12164600-12171000 Weak transcription iPS-20b Cell Line embryonic stem cell
28 chr6:12164600-12171800 Weak transcription Fetal Adrenal Gland Adrenal Gland
29 chr6:12164600-12172200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr6:12164600-12172200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
31 chr6:12164600-12173800 Weak transcription Sigmoid Colon Sigmoid Colon
32 chr6:12164600-12174000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr6:12164600-12175800 Weak transcription HSMMtube muscle
34 chr6:12164600-12176000 Weak transcription Gastric stomach
35 chr6:12164800-12167600 Weak transcription Fetal Intestine Small intestine
36 chr6:12164800-12167600 Weak transcription Fetal Stomach stomach
37 chr6:12164800-12167600 Weak transcription Thymus Thymus
38 chr6:12164800-12168600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
39 chr6:12164800-12168600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
40 chr6:12164800-12169000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr6:12164800-12169200 Weak transcription Primary T cells fromperipheralblood blood
42 chr6:12164800-12170400 Weak transcription Fetal Muscle Leg muscle
43 chr6:12164800-12170600 Weak transcription Adipose Nuclei Adipose
44 chr6:12164800-12170800 Weak transcription iPS-18 Cell Line embryonic stem cell
45 chr6:12164800-12170800 Weak transcription Brain Inferior Temporal Lobe brain
46 chr6:12164800-12171000 Weak transcription HUES64 Cell Line embryonic stem cell
47 chr6:12164800-12171200 Weak transcription Fetal Brain Female brain
48 chr6:12164800-12171600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
49 chr6:12164800-12171800 Weak transcription H9 Cell Line embryonic stem cell
50 chr6:12164800-12173400 Weak transcription Fetal Kidney kidney

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Last update: Aug 31, 2015