Variant report

Variant rs11971803
Chromosome Location chr7:4832198-4832199
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:4816200-4834400 Weak transcription ES-I3 Cell Line embryonic stem cell
2 chr7:4816600-4834800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
3 chr7:4816800-4834400 Weak transcription K562 blood
4 chr7:4816800-4834800 Strong transcription Primary hematopoietic stem cells short term culture blood
5 chr7:4820200-4832800 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
6 chr7:4820200-4832800 Strong transcription Dnd41 blood
7 chr7:4820400-4832200 Strong transcription Placenta Amnion Placenta Amnion
8 chr7:4820400-4832400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
9 chr7:4820400-4834400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr7:4820600-4832800 Strong transcription Muscle Satellite Cultured Cells --
11 chr7:4821400-4834600 Strong transcription Breast Myoepithelial Primary Cells Breast
12 chr7:4821800-4834200 Weak transcription HSMM muscle
13 chr7:4823800-4833000 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr7:4826200-4843400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr7:4826400-4832400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
16 chr7:4826400-4832800 Weak transcription Primary T killer memory cells from peripheral blood blood
17 chr7:4828600-4832400 Weak transcription HepG2 liver
18 chr7:4828800-4835800 Weak transcription Fetal Lung lung
19 chr7:4830200-4832200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
20 chr7:4830400-4832800 Genic enhancers Foreskin Melanocyte Primary Cells skin01 Skin
21 chr7:4830800-4832800 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr7:4830800-4832800 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
23 chr7:4831000-4832800 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
24 chr7:4831000-4832800 Genic enhancers Placenta Placenta
25 chr7:4831000-4832800 Strong transcription A549 lung
26 chr7:4831400-4832400 Transcr. at gene 5' and 3' Spleen Spleen
27 chr7:4831400-4832600 Active TSS Brain Angular Gyrus brain
28 chr7:4831400-4834400 Weak transcription HSMMtube muscle
29 chr7:4831600-4832200 Enhancers Primary B cells from cord blood blood
30 chr7:4831600-4832200 Active TSS Brain Germinal Matrix brain
31 chr7:4831600-4832400 Active TSS HUES6 Cell Line embryonic stem cell
32 chr7:4831600-4832400 Active TSS Gastric stomach
33 chr7:4831600-4832600 Transcr. at gene 5' and 3' iPS DF 19.11 Cell Line embryonic stem cell
34 chr7:4831600-4832600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
35 chr7:4831600-4832800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
36 chr7:4831600-4832800 Enhancers Fetal Brain Male brain
37 chr7:4831600-4832800 Enhancers Stomach Mucosa stomach
38 chr7:4831600-4832800 Enhancers HUVEC blood vessel
39 chr7:4831600-4833000 Enhancers Fetal Heart heart
40 chr7:4831600-4833000 Genic enhancers Lung lung
41 chr7:4831600-4833400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr7:4831600-4834000 Weak transcription Osteobl bone
43 chr7:4831600-4834400 Weak transcription GM12878-XiMat blood
44 chr7:4831800-4832200 Active TSS iPS-15b Cell Line embryonic stem cell
45 chr7:4831800-4832200 Active TSS Primary T helper cells PMA-I stimulated --
46 chr7:4831800-4832200 Active TSS Brain Hippocampus Middle brain
47 chr7:4831800-4832200 Active TSS Stomach Smooth Muscle stomach
48 chr7:4831800-4832400 Active TSS Primary T cells from cord blood blood
49 chr7:4831800-4832400 Active TSS Brain Anterior Caudate brain
50 chr7:4831800-4832400 Active TSS Brain Cingulate Gyrus brain

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