Variant report

Variant	rs11973957
Chromosome Location	chr18:8651371-8651372
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs11982137	1.00[AMR][1000 genomes]
rs1873066	1.00[AMR][1000 genomes]
rs6593314	1.00[AMR][1000 genomes]
rs6953629	1.00[AMR][1000 genomes]
rs7793217	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv2200	chr18:8618182-8663130	Enhancers Flanking Active TSS Strong transcription Weak transcription Active TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region miRNA target site	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:8638800-8653800	Weak transcription	Fetal Heart	heart
2	chr18:8638800-8654200	Weak transcription	A549	lung
3	chr18:8640400-8655200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr18:8640600-8657400	Weak transcription	NHLF	lung
5	chr18:8641000-8654800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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