Variant report

Variant	rs11991252
Chromosome Location	chr8:114410412-114410413
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs11985048	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11985054	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11985190	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11985229	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11985340	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11986021	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11986815	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11987994	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11989015	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11991205	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11991363	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11993804	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11995017	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1478675	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1513528	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2754581	chr8:114029421-114419106	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv817379	chr8:114338391-115011632	Active TSS Enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Flanking Active TSS Weak transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	esv2754463	chr8:114353649-114501547	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Flanking Active TSS Active TSS Enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
4	nsv1019362	chr8:114377031-114419106	Active TSS Enhancers Weak transcription	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
5	nsv1031488	chr8:114382671-114419106	Weak transcription Enhancers Active TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
6	esv1803306	chr8:114406930-114423622	Weak transcription Enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:114399800-114415000	Weak transcription	Fetal Lung	lung

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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