Variant report

Variant	rs11999216
Chromosome Location	chr9:72237294-72237295
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr9:72195299..72197073-chr9:72236850..72239797,2	MCF-7	breast:

rs_ID	r²[population]
rs58139268	1.00[AMR][1000 genomes]
rs6559655	1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7855533	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7869626	1.00[AMR][1000 genomes]

Chromatin state (count:31 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:72219800-72242600	Weak transcription	Left Ventricle	heart
2	chr9:72232200-72239800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr9:72233600-72237400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
4	chr9:72234800-72237800	Weak transcription	Fetal Kidney	kidney
5	chr9:72236000-72240600	Enhancers	Fetal Brain Male	brain
6	chr9:72236200-72238400	Enhancers	Brain Angular Gyrus	brain
7	chr9:72236400-72238800	Enhancers	Fetal Lung	lung
8	chr9:72236600-72237800	Enhancers	Fetal Brain Female	brain
9	chr9:72236600-72238000	Enhancers	Brain Germinal Matrix	brain
10	chr9:72236800-72238000	Enhancers	Breast Myoepithelial Primary Cells	Breast
11	chr9:72236800-72238000	Enhancers	Brain Anterior Caudate	brain
12	chr9:72236800-72238200	Enhancers	Brain Cingulate Gyrus	brain
13	chr9:72236800-72238200	Enhancers	Brain Hippocampus Middle	brain
14	chr9:72236800-72238200	Enhancers	Fetal Muscle Leg	muscle
15	chr9:72236800-72238200	Enhancers	NH-A	brain
16	chr9:72236800-72239600	Enhancers	Liver	Liver
17	chr9:72237000-72238000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
18	chr9:72237000-72238000	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
19	chr9:72237000-72238000	Enhancers	Osteobl	bone
20	chr9:72237000-72238200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
21	chr9:72237200-72237400	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
22	chr9:72237200-72237400	Enhancers	Aorta	Aorta
23	chr9:72237200-72237800	Enhancers	NHDF-Ad	bronchial
24	chr9:72237200-72237800	Enhancers	NHEK	skin
25	chr9:72237200-72238000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
26	chr9:72237200-72238000	Enhancers	HMEC	breast
27	chr9:72237200-72238200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
28	chr9:72237200-72238200	Enhancers	Brain Inferior Temporal Lobe	brain
29	chr9:72237200-72238200	Enhancers	Brain Substantia Nigra	brain
30	chr9:72237200-72238400	Enhancers	Fetal Stomach	stomach
31	chr9:72237200-72238800	Enhancers	Ovary	ovary

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