Variant report

Variant rs12005738
Chromosome Location chr9:140373303-140373304
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:140356600-140377000 Weak transcription Rectal Smooth Muscle rectum
2 chr9:140362000-140373800 Weak transcription Gastric stomach
3 chr9:140370800-140376400 Weak transcription Stomach Smooth Muscle stomach
4 chr9:140370800-140383400 Weak transcription Duodenum Smooth Muscle Duodenum
5 chr9:140371000-140373400 Weak transcription Adipose Nuclei Adipose
6 chr9:140371000-140376400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
7 chr9:140371000-140385800 Weak transcription Primary B cells from peripheral blood blood
8 chr9:140371200-140374200 Weak transcription Skeletal Muscle Female skeletal muscle
9 chr9:140371200-140382200 Weak transcription Brain Anterior Caudate brain
10 chr9:140371200-140383200 Weak transcription Primary B cells from cord blood blood
11 chr9:140371400-140373400 Weak transcription Skeletal Muscle Male skeletal muscle
12 chr9:140371400-140374600 Weak transcription Aorta Aorta
13 chr9:140371400-140376400 Weak transcription Pancreatic Islets Pancreatic Islet
14 chr9:140371600-140373400 Weak transcription Brain Cingulate Gyrus brain
15 chr9:140371600-140375200 Weak transcription Lung lung
16 chr9:140371600-140376000 Strong transcription Breast Myoepithelial Primary Cells Breast
17 chr9:140371800-140373600 Weak transcription Liver Liver
18 chr9:140371800-140382000 Weak transcription Fetal Intestine Small intestine
19 chr9:140372200-140376000 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
20 chr9:140372400-140375600 Strong transcription Pancreas Pancrea
21 chr9:140372400-140375800 Bivalent Enhancer Fetal Muscle Trunk muscle
22 chr9:140372400-140376400 Weak transcription Rectal Mucosa Donor 29 rectum
23 chr9:140372600-140373400 Bivalent Enhancer HepG2 liver
24 chr9:140373000-140373800 Enhancers H1 Cell Line embryonic stem cell
25 chr9:140373000-140373800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
26 chr9:140373000-140374000 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
27 chr9:140373000-140374200 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin02 Skin
28 chr9:140373000-140374600 Enhancers Brain Hippocampus Middle brain
29 chr9:140373000-140374800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr9:140373000-140374800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
31 chr9:140373000-140375000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
32 chr9:140373000-140377600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
33 chr9:140373200-140373600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr9:140373200-140373800 Bivalent Enhancer Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr9:140373200-140373800 Enhancers Esophagus oesophagus
36 chr9:140373200-140373800 Enhancers HSMMtube muscle
37 chr9:140373200-140374000 Genic enhancers Foreskin Melanocyte Primary Cells skin01 Skin
38 chr9:140373200-140374000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
39 chr9:140373200-140374000 Genic enhancers Ovary ovary
40 chr9:140373200-140374200 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin01 Skin
41 chr9:140373200-140374400 Genic enhancers Brain Inferior Temporal Lobe brain
42 chr9:140373200-140374600 Enhancers Fetal Muscle Leg muscle
43 chr9:140373200-140374800 Enhancers Cortex derived primary cultured neurospheres brain
44 chr9:140373200-140375000 Enhancers Brain Angular Gyrus brain
45 chr9:140373200-140376000 Strong transcription Right Ventricle heart
46 chr9:140373200-140376000 Genic enhancers Spleen Spleen
47 chr9:140373200-140377400 Bivalent Enhancer Placenta Placenta

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