Variant report

Variant rs1201791
Chromosome Location chr12:83289885-83289886
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:83274400-83304200 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr12:83274600-83298400 Weak transcription Brain Angular Gyrus brain
3 chr12:83278200-83313400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr12:83279000-83336400 Weak transcription Cortex derived primary cultured neurospheres brain
5 chr12:83281000-83306400 Weak transcription Colon Smooth Muscle Colon
6 chr12:83282000-83295200 Weak transcription Fetal Stomach stomach
7 chr12:83282400-83291800 Weak transcription Fetal Lung lung
8 chr12:83282400-83294600 Weak transcription Fetal Kidney kidney
9 chr12:83285000-83290000 Weak transcription Brain Inferior Temporal Lobe brain
10 chr12:83285000-83291400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
11 chr12:83286200-83292400 Weak transcription Fetal Brain Female brain
12 chr12:83287400-83292000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr12:83288000-83292200 Weak transcription Fetal Heart heart
14 chr12:83288200-83290600 Weak transcription Adipose Nuclei Adipose
15 chr12:83288400-83292000 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr12:83288400-83304200 Weak transcription Fetal Muscle Leg muscle
17 chr12:83289000-83292400 Weak transcription Fetal Intestine Large intestine
18 chr12:83289600-83290000 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr12:83289600-83290000 ZNF genes & repeats Ovary ovary
20 chr12:83289600-83290200 Enhancers Gastric stomach
21 chr12:83289600-83290200 Enhancers Rectal Mucosa Donor 31 rectum
22 chr12:83289600-83290600 Strong transcription Primary monocytes fromperipheralblood blood
23 chr12:83289600-83293200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr12:83289600-83293200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
25 chr12:83289800-83290000 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr12:83289800-83290000 Flanking Active TSS Duodenum Mucosa Duodenum
27 chr12:83289800-83290000 Genic enhancers Esophagus oesophagus
28 chr12:83289800-83290000 Enhancers Stomach Mucosa stomach
29 chr12:83289800-83290200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
30 chr12:83289800-83290200 Genic enhancers Brain Anterior Caudate brain
31 chr12:83289800-83290200 Enhancers Brain Hippocampus Middle brain
32 chr12:83289800-83290200 Flanking Active TSS Brain Substantia Nigra brain
33 chr12:83289800-83290400 Enhancers Fetal Intestine Small intestine
34 chr12:83289800-83290600 Enhancers Breast Myoepithelial Primary Cells Breast
35 chr12:83289800-83290600 Active TSS Rectal Mucosa Donor 29 rectum
36 chr12:83289800-83291000 Enhancers Placenta Amnion Placenta Amnion
37 chr12:83289800-83291000 Strong transcription Monocytes-CD14+_RO01746 blood

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