Variant report

Variant rs12026401
Chromosome Location chr1:10011112-10011113
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:96 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:10004000-10034000 Weak transcription Aorta Aorta
2 chr1:10004200-10019400 Weak transcription NH-A brain
3 chr1:10004200-10021000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr1:10004200-10033800 Weak transcription Gastric stomach
5 chr1:10004400-10018200 Weak transcription NHLF lung
6 chr1:10004400-10021200 Weak transcription HSMM muscle
7 chr1:10004400-10031600 Weak transcription Fetal Intestine Large intestine
8 chr1:10004600-10021000 Weak transcription HSMMtube muscle
9 chr1:10004600-10032400 Weak transcription Placenta Amnion Placenta Amnion
10 chr1:10004800-10031600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
11 chr1:10004800-10032200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
12 chr1:10004800-10032400 Weak transcription Colon Smooth Muscle Colon
13 chr1:10005600-10015000 Strong transcription Fetal Intestine Small intestine
14 chr1:10008000-10014200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr1:10008000-10031800 Weak transcription Lung lung
16 chr1:10008000-10032000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
17 chr1:10008000-10032200 Weak transcription Colonic Mucosa Colon
18 chr1:10008000-10035000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr1:10008200-10011600 Weak transcription Spleen Spleen
20 chr1:10008200-10032000 Weak transcription Liver Liver
21 chr1:10008200-10032200 Weak transcription Breast Myoepithelial Primary Cells Breast
22 chr1:10008400-10031800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
23 chr1:10008400-10032000 Weak transcription Duodenum Mucosa Duodenum
24 chr1:10008400-10032200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
25 chr1:10008600-10031800 Weak transcription Skeletal Muscle Male skeletal muscle
26 chr1:10008600-10033200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
27 chr1:10008600-10035600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr1:10009000-10013000 Enhancers Primary monocytes fromperipheralblood blood
29 chr1:10009000-10014200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr1:10009600-10011800 Enhancers Primary hematopoietic stem cells blood
31 chr1:10009600-10012000 Enhancers Primary hematopoietic stem cells short term culture blood
32 chr1:10009800-10011400 Enhancers Brain Cingulate Gyrus brain
33 chr1:10009800-10011400 Enhancers Brain Substantia Nigra brain
34 chr1:10010000-10011200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
35 chr1:10010000-10011200 Enhancers Primary T helper naive cells fromperipheralblood blood
36 chr1:10010000-10011400 Enhancers Primary T helper cells PMA-I stimulated --
37 chr1:10010000-10011400 Enhancers Adipose Nuclei Adipose
38 chr1:10010000-10011800 Flanking Active TSS Monocytes-CD14+_RO01746 blood
39 chr1:10010200-10011200 Enhancers Primary Natural Killer cells fromperipheralblood blood
40 chr1:10010200-10011200 Enhancers Brain Inferior Temporal Lobe brain
41 chr1:10010200-10011400 Enhancers Primary T killer memory cells from peripheral blood blood
42 chr1:10010200-10011800 Flanking Active TSS Primary neutrophils fromperipheralblood blood
43 chr1:10010200-10011800 Enhancers Placenta Placenta
44 chr1:10010400-10011200 Enhancers Fetal Muscle Leg muscle
45 chr1:10010600-10011200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr1:10010600-10011200 Enhancers HUES48 Cell Line embryonic stem cell
47 chr1:10010600-10011200 Flanking Active TSS Primary B cells from peripheral blood blood
48 chr1:10010600-10011200 Enhancers Fetal Heart heart
49 chr1:10010600-10011400 Enhancers iPS-18 Cell Line embryonic stem cell
50 chr1:10010600-10011400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --

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