Variant report

Variant rs12027719
Chromosome Location chr1:161057879-161057880
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:161039600-161066800 Weak transcription Right Atrium heart
2 chr1:161052200-161058400 Enhancers Pancreas Pancrea
3 chr1:161053200-161059200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr1:161053400-161058600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
5 chr1:161053600-161058800 Weak transcription Skeletal Muscle Female skeletal muscle
6 chr1:161053600-161063600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
7 chr1:161054200-161058800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr1:161055000-161058400 Weak transcription Breast Myoepithelial Primary Cells Breast
9 chr1:161055000-161058400 Weak transcription Gastric stomach
10 chr1:161055200-161058400 Weak transcription Primary hematopoietic stem cells short term culture blood
11 chr1:161055200-161064600 Weak transcription Fetal Lung lung
12 chr1:161055400-161058000 Weak transcription Osteobl bone
13 chr1:161055400-161058200 Weak transcription A549 lung
14 chr1:161055400-161058200 Weak transcription NH-A brain
15 chr1:161055400-161058200 Weak transcription NHLF lung
16 chr1:161055400-161058600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr1:161055400-161058600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
18 chr1:161055400-161059200 Active TSS Esophagus oesophagus
19 chr1:161055400-161061400 Weak transcription HSMMtube muscle
20 chr1:161055400-161062000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr1:161055400-161062400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr1:161055600-161058200 Weak transcription Muscle Satellite Cultured Cells --
23 chr1:161055800-161058000 Weak transcription HSMM muscle
24 chr1:161055800-161058400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
25 chr1:161056000-161058400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr1:161056400-161058800 Weak transcription HUES6 Cell Line embryonic stem cell
27 chr1:161056600-161058200 Enhancers Rectal Mucosa Donor 31 rectum
28 chr1:161056600-161058800 Weak transcription H1 Cell Line embryonic stem cell
29 chr1:161056600-161058800 Weak transcription Fetal Intestine Large intestine
30 chr1:161056800-161058200 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr1:161056800-161058200 Weak transcription Rectal Mucosa Donor 29 rectum
32 chr1:161056800-161058200 Weak transcription NHEK skin
33 chr1:161056800-161058600 Weak transcription ES-I3 Cell Line embryonic stem cell
34 chr1:161056800-161058600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
35 chr1:161056800-161058600 Weak transcription Colonic Mucosa Colon
36 chr1:161056800-161058600 Weak transcription Duodenum Mucosa Duodenum
37 chr1:161056800-161059600 Weak transcription iPS-15b Cell Line embryonic stem cell
38 chr1:161057000-161058400 Weak transcription Hela-S3 cervix
39 chr1:161057000-161058800 Weak transcription Fetal Intestine Small intestine
40 chr1:161057000-161062400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr1:161057200-161058600 Weak transcription Lung lung
42 chr1:161057200-161059800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr1:161057400-161058000 Enhancers Placenta Amnion Placenta Amnion
44 chr1:161057400-161058400 Active TSS Placenta Placenta
45 chr1:161057600-161059400 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
46 chr1:161057600-161059800 Enhancers HMEC breast
47 chr1:161057800-161058200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
48 chr1:161057800-161058400 Flanking Active TSS Stomach Mucosa stomach
49 chr1:161057800-161059200 Enhancers NHDF-Ad bronchial
50 chr1:161057800-161059600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin

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