Variant report

Variant rs12030564
Chromosome Location chr1:84629845-84629846
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:60 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:84610400-84633400 Weak transcription Fetal Kidney kidney
2 chr1:84614000-84633800 Weak transcription Rectal Mucosa Donor 29 rectum
3 chr1:84615800-84634800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
4 chr1:84616200-84635200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
5 chr1:84618800-84630400 Weak transcription Primary B cells from cord blood blood
6 chr1:84619200-84630200 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr1:84622200-84630000 Weak transcription Duodenum Smooth Muscle Duodenum
8 chr1:84622400-84635800 Weak transcription Small Intestine intestine
9 chr1:84623000-84639200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr1:84623800-84630000 Enhancers Primary T helper cells PMA-I stimulated --
11 chr1:84624000-84651800 Weak transcription Thymus Thymus
12 chr1:84624200-84630800 Weak transcription Primary hematopoietic stem cells short term culture blood
13 chr1:84624800-84633200 Enhancers Primary T helper naive cells from peripheral blood blood
14 chr1:84625600-84635600 Enhancers Primary T killer naive cells fromperipheralblood blood
15 chr1:84625800-84634000 Weak transcription Rectal Mucosa Donor 31 rectum
16 chr1:84626000-84630000 Weak transcription Primary hematopoietic stem cells blood
17 chr1:84626400-84630400 Enhancers Primary T killer memory cells from peripheral blood blood
18 chr1:84627200-84631000 Weak transcription HUVEC blood vessel
19 chr1:84627600-84635400 Enhancers Primary T helper cells fromperipheralblood blood
20 chr1:84628800-84630400 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr1:84628800-84630600 Enhancers Primary mononuclear cells fromperipheralblood Blood
22 chr1:84629200-84636400 Enhancers Primary T helper naive cells fromperipheralblood blood
23 chr1:84629200-84654000 Weak transcription Spleen Spleen
24 chr1:84629400-84630000 Weak transcription Primary T cells fromperipheralblood blood
25 chr1:84629400-84630400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
26 chr1:84629400-84630600 Active TSS NHDF-Ad bronchial
27 chr1:84629400-84632800 Active TSS Brain Dorsolateral Prefrontal Cortex brain
28 chr1:84629400-84644400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
29 chr1:84629600-84630000 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr1:84629600-84630000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
31 chr1:84629600-84630200 Weak transcription Dnd41 blood
32 chr1:84629600-84630600 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr1:84629600-84630600 Active TSS Osteobl bone
34 chr1:84629600-84632400 Active TSS Brain Angular Gyrus brain
35 chr1:84629600-84632800 Active TSS Brain Cingulate Gyrus brain
36 chr1:84629600-84633000 Active TSS Brain Germinal Matrix brain
37 chr1:84629600-84633000 Active TSS Brain Hippocampus Middle brain
38 chr1:84629600-84633800 Active TSS Brain Anterior Caudate brain
39 chr1:84629600-84634000 Active TSS Fetal Brain Female brain
40 chr1:84629800-84630000 Enhancers Primary T regulatory cells fromperipheralblood blood
41 chr1:84629800-84630200 Enhancers Primary T cells from cord blood blood
42 chr1:84629800-84630200 Active TSS Fetal Lung lung
43 chr1:84629800-84630400 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
44 chr1:84629800-84630600 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr1:84629800-84630600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr1:84629800-84630600 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
47 chr1:84629800-84630600 Active TSS Fetal Muscle Trunk muscle
48 chr1:84629800-84630600 Active TSS Fetal Stomach stomach
49 chr1:84629800-84630600 Active TSS Right Atrium heart
50 chr1:84629800-84630600 Active TSS NH-A brain

Quick Search:


  
Input of quick search could be:

what's new

Quick links