The 2.0 version of rSNPBase

Variant report

Variant rs12030683
Chromosome Location chr1:95360309-95360310
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:95329000-95385000 Weak transcription Colonic Mucosa Colon
2 chr1:95333200-95370000 Weak transcription Small Intestine intestine
3 chr1:95340200-95361200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr1:95343400-95361400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr1:95348800-95360800 Weak transcription Lung lung
6 chr1:95349800-95364200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr1:95350000-95360800 Weak transcription Brain Inferior Temporal Lobe brain
8 chr1:95350200-95361000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr1:95350200-95361000 Weak transcription Adipose Nuclei Adipose
10 chr1:95350200-95361000 Weak transcription Fetal Heart heart
11 chr1:95350200-95361400 Weak transcription A549 lung
12 chr1:95350400-95360400 Weak transcription Fetal Kidney kidney
13 chr1:95350400-95360600 Weak transcription Brain Cingulate Gyrus brain
14 chr1:95350400-95360600 Weak transcription Brain Germinal Matrix brain
15 chr1:95350400-95360800 Weak transcription Esophagus oesophagus
16 chr1:95350400-95361000 Weak transcription Aorta Aorta
17 chr1:95350400-95361000 Weak transcription Colon Smooth Muscle Colon
18 chr1:95350400-95361000 Weak transcription Fetal Lung lung
19 chr1:95350400-95361200 Weak transcription Fetal Brain Male brain
20 chr1:95350400-95368800 Weak transcription Spleen Spleen
21 chr1:95350400-95378200 Weak transcription Brain Angular Gyrus brain
22 chr1:95351200-95360400 Weak transcription Brain Hippocampus Middle brain
23 chr1:95351200-95360400 Weak transcription Brain Substantia Nigra brain
24 chr1:95351400-95361200 Weak transcription Brain Anterior Caudate brain
25 chr1:95351800-95360800 Weak transcription Stomach Smooth Muscle stomach
26 chr1:95352000-95361200 Weak transcription Right Ventricle heart
27 chr1:95352400-95361200 Weak transcription Ovary ovary
28 chr1:95353200-95360600 Weak transcription Fetal Brain Female brain
29 chr1:95353400-95373600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
30 chr1:95353600-95360600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
31 chr1:95353600-95361200 Weak transcription H9 Cell Line embryonic stem cell
32 chr1:95353800-95360800 Weak transcription ES-I3 Cell Line embryonic stem cell
33 chr1:95353800-95363400 Weak transcription ES-WA7 Cell Line embryonic stem cell
34 chr1:95353800-95373600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
35 chr1:95354600-95367800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr1:95354800-95360400 Weak transcription HUES48 Cell Line embryonic stem cell
37 chr1:95354800-95361000 Weak transcription H1 Cell Line embryonic stem cell
38 chr1:95355000-95360400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
39 chr1:95355000-95375200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
40 chr1:95355200-95373000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr1:95355800-95364400 Strong transcription Fetal Intestine Large intestine
42 chr1:95356000-95360800 Weak transcription NHEK skin
43 chr1:95356000-95363400 Strong transcription Breast Myoepithelial Primary Cells Breast
44 chr1:95356000-95363800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr1:95356000-95365400 Strong transcription Fetal Adrenal Gland Adrenal Gland
46 chr1:95356000-95370200 Strong transcription Fetal Muscle Trunk muscle
47 chr1:95356000-95370800 Strong transcription Duodenum Mucosa Duodenum
48 chr1:95356200-95361000 Weak transcription HMEC breast
49 chr1:95356200-95375000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
50 chr1:95356400-95363800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015