The 2.0 version of rSNPBase

Variant report

Variant rs12037458
Chromosome Location chr1:95460995-95460996
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:95429000-95467600 Weak transcription Stomach Smooth Muscle stomach
2 chr1:95447000-95490800 Weak transcription Fetal Intestine Large intestine
3 chr1:95448200-95491000 Weak transcription Primary B cells from cord blood blood
4 chr1:95452600-95467000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
5 chr1:95452800-95468400 Weak transcription Fetal Intestine Small intestine
6 chr1:95453200-95463200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr1:95453600-95468400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr1:95454000-95467600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr1:95455200-95473600 Weak transcription Gastric stomach
10 chr1:95455400-95467800 Weak transcription Brain Substantia Nigra brain
11 chr1:95455600-95461000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
12 chr1:95455600-95465000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr1:95455600-95467600 Weak transcription Brain Hippocampus Middle brain
14 chr1:95455800-95463400 Weak transcription HSMMtube muscle
15 chr1:95455800-95463600 Weak transcription ES-I3 Cell Line embryonic stem cell
16 chr1:95455800-95467800 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr1:95456000-95461400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
18 chr1:95456200-95461200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
19 chr1:95456200-95465000 Weak transcription Fetal Muscle Leg muscle
20 chr1:95457000-95468600 Weak transcription Pancreatic Islets Pancreatic Islet
21 chr1:95457800-95461800 Enhancers HUVEC blood vessel
22 chr1:95459400-95465800 Weak transcription Esophagus oesophagus
23 chr1:95459400-95467600 Weak transcription Ovary ovary
24 chr1:95459600-95461400 Weak transcription Muscle Satellite Cultured Cells --
25 chr1:95459600-95473000 Weak transcription Aorta Aorta
26 chr1:95459600-95473000 Weak transcription Pancreas Pancrea
27 chr1:95459800-95461000 Enhancers Primary T helper naive cells from peripheral blood blood
28 chr1:95459800-95461600 Enhancers Primary T helper naive cells fromperipheralblood blood
29 chr1:95459800-95465000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
30 chr1:95460000-95461000 Enhancers Primary T cells from cord blood blood
31 chr1:95460000-95461000 Enhancers Primary T killer naive cells fromperipheralblood blood
32 chr1:95460200-95461000 Weak transcription Fetal Adrenal Gland Adrenal Gland
33 chr1:95460200-95461200 Weak transcription Cortex derived primary cultured neurospheres brain
34 chr1:95460200-95461200 Weak transcription NH-A brain
35 chr1:95460200-95461400 Weak transcription Spleen Spleen
36 chr1:95460200-95462400 Weak transcription Fetal Lung lung
37 chr1:95460200-95467600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
38 chr1:95460400-95461400 Weak transcription Hela-S3 cervix
39 chr1:95460400-95467600 Weak transcription Right Atrium heart
40 chr1:95460400-95467600 Weak transcription Right Ventricle heart
41 chr1:95460400-95467600 Weak transcription Skeletal Muscle Male skeletal muscle
42 chr1:95460400-95467800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
43 chr1:95460400-95478400 Weak transcription Left Ventricle heart
44 chr1:95460600-95461000 Weak transcription Osteobl bone
45 chr1:95460600-95465400 Weak transcription Breast Myoepithelial Primary Cells Breast
46 chr1:95460600-95468000 Weak transcription Adipose Nuclei Adipose
47 chr1:95460800-95461600 Enhancers Fetal Kidney kidney

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Last update: Aug 31, 2015