Variant report
| Variant | rs12040109 |
|---|---|
| Chromosome Location | chr1:173897247-173897248 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:173856600-173907200 | Weak transcription | Brain Germinal Matrix | brain |
| 2 | chr1:173857400-173902000 | Weak transcription | HSMMtube | muscle |
| 3 | chr1:173858200-173902800 | Weak transcription | Left Ventricle | heart |
| 4 | chr1:173870000-173898000 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 5 | chr1:173871200-173908400 | Weak transcription | Spleen | Spleen |
| 6 | chr1:173874400-173899800 | Weak transcription | Primary T cells from cord blood | blood |
| 7 | chr1:173879200-173899400 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 8 | chr1:173882800-173912400 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 9 | chr1:173888400-173900200 | Weak transcription | Right Atrium | heart |
| 10 | chr1:173891200-173899400 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 11 | chr1:173893400-173908400 | Weak transcription | Colonic Mucosa | Colon |
| 12 | chr1:173894000-173904800 | Weak transcription | Brain Cingulate Gyrus | brain |
| 13 | chr1:173894400-173905000 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 14 | chr1:173894600-173899200 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 15 | chr1:173894600-173907800 | Weak transcription | Colon Smooth Muscle | Colon |
| 16 | chr1:173894600-173914400 | Weak transcription | Right Ventricle | heart |
| 17 | chr1:173895000-173902400 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 18 | chr1:173895000-173903400 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 19 | chr1:173895200-173900000 | Weak transcription | A549 | lung |
| 20 | chr1:173895200-173912200 | Weak transcription | Stomach Mucosa | stomach |
| 21 | chr1:173895400-173898200 | Weak transcription | Stomach Smooth Muscle | stomach |
| 22 | chr1:173895400-173900000 | Weak transcription | K562 | blood |
| 23 | chr1:173895400-173907600 | Weak transcription | Ovary | ovary |
| 24 | chr1:173895600-173901200 | Weak transcription | HUVEC | blood vessel |
| 25 | chr1:173895600-173906200 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 26 | chr1:173895800-173906200 | Weak transcription | HepG2 | liver |
| 27 | chr1:173896000-173899400 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 28 | chr1:173896000-173899600 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 29 | chr1:173896400-173901400 | Weak transcription | Duodenum Mucosa | Duodenum |
| 30 | chr1:173896400-173902800 | Weak transcription | Brain Anterior Caudate | brain |
| 31 | chr1:173896400-173907800 | Weak transcription | Gastric | stomach |
| 32 | chr1:173896400-173910000 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 33 | chr1:173896400-173914400 | Weak transcription | Pancreas | Pancrea |
| 34 | chr1:173896600-173899400 | Weak transcription | Fetal Intestine Large | intestine |
| 35 | chr1:173896600-173902800 | Weak transcription | Adipose Nuclei | Adipose |
| 36 | chr1:173896800-173908400 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 37 | chr1:173897000-173907800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 38 | chr1:173897000-173908400 | Weak transcription | Fetal Intestine Small | intestine |
| 39 | chr1:173897200-173897600 | Weak transcription | Liver | Liver |
| 40 | chr1:173897200-173899600 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
