Variant report

Variant rs12040935
Chromosome Location chr1:246273673-246273674
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:246247800-246273800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr1:246258400-246279800 Weak transcription Primary T cells from cord blood blood
3 chr1:246269800-246273800 Weak transcription Primary neutrophils fromperipheralblood blood
4 chr1:246270600-246274400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
5 chr1:246270600-246274600 Weak transcription Primary hematopoietic stem cells blood
6 chr1:246271200-246280200 Weak transcription HSMM muscle
7 chr1:246271200-246280400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
8 chr1:246271200-246302200 Weak transcription Osteobl bone
9 chr1:246271800-246274400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
10 chr1:246271800-246276800 Weak transcription Fetal Kidney kidney
11 chr1:246272000-246274800 Weak transcription Monocytes-CD14+_RO01746 blood
12 chr1:246272200-246273800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr1:246272200-246277000 Weak transcription Duodenum Mucosa Duodenum
14 chr1:246272400-246312000 Weak transcription Gastric stomach
15 chr1:246273000-246274000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr1:246273000-246274600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr1:246273000-246274800 Enhancers Fetal Stomach stomach
18 chr1:246273000-246275200 Enhancers Colon Smooth Muscle Colon
19 chr1:246273200-246273800 Enhancers HUES64 Cell Line embryonic stem cell
20 chr1:246273200-246274200 Genic enhancers Primary hematopoietic stem cells short term culture blood
21 chr1:246273200-246274400 Enhancers A549 lung
22 chr1:246273200-246274400 Enhancers NH-A brain
23 chr1:246273200-246275000 Enhancers Rectal Smooth Muscle rectum
24 chr1:246273400-246274000 Enhancers iPS-20b Cell Line embryonic stem cell
25 chr1:246273400-246274000 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
26 chr1:246273400-246274400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr1:246273400-246274800 Enhancers NHLF lung
28 chr1:246273600-246274000 Enhancers H1 Cell Line embryonic stem cell
29 chr1:246273600-246274000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
30 chr1:246273600-246274000 Enhancers HUES48 Cell Line embryonic stem cell
31 chr1:246273600-246274000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
32 chr1:246273600-246274000 Enhancers iPS-15b Cell Line embryonic stem cell
33 chr1:246273600-246274000 Bivalent Enhancer Ganglion Eminence derived primary cultured neurospheres brain
34 chr1:246273600-246274000 Flanking Active TSS K562 blood
35 chr1:246273600-246274200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
36 chr1:246273600-246274200 Flanking Active TSS Stomach Smooth Muscle stomach
37 chr1:246273600-246274400 ZNF genes & repeats Primary B cells from cord blood blood

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