Variant report

Variant	rs12042767
Chromosome Location	chr1:214599936-214599937
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs11120321	0.92[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.82[AFR][1000 genomes];0.82[ASN][1000 genomes]

Chromatin state (count:70 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:214572600-214612600	Weak transcription	Fetal Intestine Small	intestine
2	chr1:214576800-214612200	Weak transcription	Fetal Intestine Large	intestine
3	chr1:214581400-214601200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
4	chr1:214584200-214603000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
5	chr1:214584400-214600000	Weak transcription	Fetal Muscle Trunk	muscle
6	chr1:214591400-214612800	Weak transcription	Pancreas	Pancrea
7	chr1:214591600-214600400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
8	chr1:214591600-214601200	Weak transcription	Gastric	stomach
9	chr1:214591600-214601400	Weak transcription	Lung	lung
10	chr1:214592000-214600200	Enhancers	Breast Myoepithelial Primary Cells	Breast
11	chr1:214592000-214602200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
12	chr1:214593200-214613000	Weak transcription	Fetal Muscle Leg	muscle
13	chr1:214593400-214602400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
14	chr1:214593400-214612800	Weak transcription	Ovary	ovary
15	chr1:214594000-214618000	Weak transcription	Stomach Smooth Muscle	stomach
16	chr1:214595400-214601200	Weak transcription	Esophagus	oesophagus
17	chr1:214595400-214602400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
18	chr1:214595400-214612800	Weak transcription	Aorta	Aorta
19	chr1:214596000-214614000	Weak transcription	Right Ventricle	heart
20	chr1:214596400-214600200	Weak transcription	Thymus	Thymus
21	chr1:214596400-214601200	Weak transcription	A549	lung
22	chr1:214596600-214602400	Enhancers	HMEC	breast
23	chr1:214596600-214603400	Enhancers	NHEK	skin
24	chr1:214596800-214601000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
25	chr1:214596800-214601200	Weak transcription	H9 Cell Line	embryonic stem cell
26	chr1:214596800-214601200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
27	chr1:214596800-214612800	Weak transcription	Left Ventricle	heart
28	chr1:214597000-214600800	Weak transcription	HUES6 Cell Line	embryonic stem cell
29	chr1:214597000-214601000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
30	chr1:214597000-214601000	Weak transcription	HUES48 Cell Line	embryonic stem cell
31	chr1:214597000-214601200	Weak transcription	Psoas Muscle	Psoas
32	chr1:214597200-214600800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
33	chr1:214597200-214601200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
34	chr1:214597200-214604200	Weak transcription	Placenta Amnion	Placenta Amnion
35	chr1:214597600-214601200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
36	chr1:214598200-214600400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
37	chr1:214598200-214601000	Enhancers	Muscle Satellite Cultured Cells	--
38	chr1:214598200-214601600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
39	chr1:214598200-214601600	Enhancers	Primary hematopoietic stem cells short term culture	blood
40	chr1:214598200-214603400	Enhancers	HSMM	muscle
41	chr1:214598200-214603400	Enhancers	Osteobl	bone
42	chr1:214598400-214600200	Enhancers	Cortex derived primary cultured neurospheres	brain
43	chr1:214598400-214600400	Enhancers	HSMMtube	muscle
44	chr1:214598400-214601000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
45	chr1:214598400-214601000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
46	chr1:214598400-214601000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
47	chr1:214598400-214601200	Enhancers	NHDF-Ad	bronchial
48	chr1:214598400-214602600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
49	chr1:214598600-214600000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
50	chr1:214598600-214600800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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