Variant report

Variant	rs12045695
Chromosome Location	chr1:215124190-215124191
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs10399921	0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10779630	0.84[ASN][1000 genomes]
rs10864141	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11120444	0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11120450	0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12022738	0.86[EUR][1000 genomes]
rs12025511	0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1377178	0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs17042163	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6540871	0.84[ASN][1000 genomes]
rs72743806	0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7527056	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:215113400-215130000	Weak transcription	NHDF-Ad	bronchial
2	chr1:215121600-215130000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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