Variant report

Variant rs12057162
Chromosome Location chr1:180169949-180169950
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:180138200-180172800 Weak transcription ES-I3 Cell Line embryonic stem cell
2 chr1:180143400-180171600 Strong transcription Fetal Stomach stomach
3 chr1:180143800-180170000 Strong transcription Osteobl bone
4 chr1:180150200-180171200 Strong transcription NHLF lung
5 chr1:180157400-180170600 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr1:180157600-180171000 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
7 chr1:180159200-180182800 Weak transcription HSMMtube muscle
8 chr1:180160000-180179200 Weak transcription HMEC breast
9 chr1:180160200-180171400 Weak transcription NH-A brain
10 chr1:180160200-180176800 Weak transcription Primary hematopoietic stem cells blood
11 chr1:180162200-180170200 Strong transcription Primary neutrophils fromperipheralblood blood
12 chr1:180164000-180173200 Weak transcription K562 blood
13 chr1:180164200-180170800 Weak transcription NHDF-Ad bronchial
14 chr1:180164800-180187800 Weak transcription Right Atrium heart
15 chr1:180165000-180177200 Weak transcription Fetal Thymus thymus
16 chr1:180165800-180171000 Weak transcription iPS-20b Cell Line embryonic stem cell
17 chr1:180166000-180171000 Weak transcription Fetal Lung lung
18 chr1:180166000-180171400 Weak transcription Brain Anterior Caudate brain
19 chr1:180166000-180173200 Weak transcription iPS-18 Cell Line embryonic stem cell
20 chr1:180166000-180173400 Weak transcription H1 Cell Line embryonic stem cell
21 chr1:180166000-180173400 Weak transcription HUES6 Cell Line embryonic stem cell
22 chr1:180166000-180175400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
23 chr1:180166200-180170600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
24 chr1:180166600-180182800 Weak transcription Brain Substantia Nigra brain
25 chr1:180166800-180172200 Weak transcription Thymus Thymus
26 chr1:180167000-180172000 Weak transcription Rectal Smooth Muscle rectum
27 chr1:180167200-180179200 Weak transcription Cortex derived primary cultured neurospheres brain
28 chr1:180167400-180171800 Weak transcription Left Ventricle heart
29 chr1:180167400-180173200 Weak transcription Skeletal Muscle Male skeletal muscle
30 chr1:180167800-180170000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
31 chr1:180167800-180170200 Weak transcription Fetal Intestine Large intestine
32 chr1:180167800-180173200 Weak transcription Right Ventricle heart
33 chr1:180167800-180176600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr1:180167800-180177000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr1:180167800-180177600 Weak transcription Colon Smooth Muscle Colon
36 chr1:180167800-180179200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
37 chr1:180167800-180179400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr1:180168000-180170200 Weak transcription Stomach Mucosa stomach
39 chr1:180168000-180170800 Strong transcription Spleen Spleen
40 chr1:180168000-180171400 Weak transcription Placenta Amnion Placenta Amnion
41 chr1:180168200-180170000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr1:180168200-180170000 Weak transcription Fetal Brain Female brain
43 chr1:180168200-180170400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr1:180168200-180172600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
45 chr1:180168200-180176800 Weak transcription Primary hematopoietic stem cells short term culture blood
46 chr1:180168200-180177200 Weak transcription Pancreas Pancrea
47 chr1:180168200-180179200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr1:180168400-180170800 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
49 chr1:180168400-180171000 Weak transcription Brain Inferior Temporal Lobe brain
50 chr1:180168400-180171000 Weak transcription Gastric stomach

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