Variant report

Variant rs12057875
Chromosome Location chr1:151176628-151176629
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:151172800-151179000 Weak transcription Gastric stomach
2 chr1:151172800-151197200 Weak transcription Placenta Amnion Placenta Amnion
3 chr1:151172800-151204400 Weak transcription Stomach Mucosa stomach
4 chr1:151173200-151178400 Weak transcription Duodenum Smooth Muscle Duodenum
5 chr1:151173200-151179200 Weak transcription Right Atrium heart
6 chr1:151173200-151179400 Weak transcription Fetal Brain Female brain
7 chr1:151173200-151182200 Weak transcription Brain Angular Gyrus brain
8 chr1:151173200-151191600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr1:151173200-151196600 Weak transcription K562 blood
10 chr1:151173200-151197000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr1:151173200-151199600 Weak transcription Rectal Smooth Muscle rectum
12 chr1:151173200-151200000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr1:151173200-151212000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
14 chr1:151173200-151227200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
15 chr1:151173600-151210600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr1:151173800-151185200 Strong transcription Fetal Intestine Small intestine
17 chr1:151174000-151194600 Weak transcription Brain Substantia Nigra brain
18 chr1:151174000-151199400 Weak transcription Small Intestine intestine
19 chr1:151174200-151179200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr1:151174200-151179200 Weak transcription Right Ventricle heart
21 chr1:151174200-151179400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
22 chr1:151174200-151200600 Weak transcription Pancreas Pancrea
23 chr1:151174400-151177400 Genic enhancers Dnd41 blood
24 chr1:151174400-151177600 Strong transcription HUES64 Cell Line embryonic stem cell
25 chr1:151174400-151179000 Weak transcription Left Ventricle heart
26 chr1:151174400-151180800 Strong transcription iPS-18 Cell Line embryonic stem cell
27 chr1:151174400-151183600 Strong transcription Fetal Thymus thymus
28 chr1:151174400-151183800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
29 chr1:151174400-151187000 Strong transcription HUES48 Cell Line embryonic stem cell
30 chr1:151174400-151189200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
31 chr1:151174400-151203800 Weak transcription Fetal Brain Male brain
32 chr1:151174600-151177400 Strong transcription iPS-20b Cell Line embryonic stem cell
33 chr1:151174600-151178200 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr1:151174600-151179600 Weak transcription Fetal Heart heart
35 chr1:151174600-151184400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
36 chr1:151174600-151185000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr1:151174600-151185200 Strong transcription Fetal Muscle Trunk muscle
38 chr1:151174800-151176800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
39 chr1:151174800-151177200 Strong transcription Muscle Satellite Cultured Cells --
40 chr1:151174800-151177400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr1:151174800-151179400 Weak transcription Primary T killer naive cells fromperipheralblood blood
42 chr1:151174800-151179400 Weak transcription Colonic Mucosa Colon
43 chr1:151174800-151180400 Weak transcription Rectal Mucosa Donor 31 rectum
44 chr1:151174800-151181800 Strong transcription A549 lung
45 chr1:151174800-151183600 Strong transcription Primary T cells from cord blood blood
46 chr1:151175000-151176800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr1:151175000-151176800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
48 chr1:151175000-151176800 Strong transcription HMEC breast
49 chr1:151175000-151177000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
50 chr1:151175000-151177200 Strong transcription Primary T helper cells fromperipheralblood blood

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