The 2.0 version of rSNPBase

Variant report

Variant rs12060375
Chromosome Location chr1:10047747-10047748
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:10021600-10049000 Weak transcription HSMM muscle
2 chr1:10028400-10050000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
3 chr1:10032800-10057000 Weak transcription Psoas Muscle Psoas
4 chr1:10034400-10048000 Weak transcription Stomach Mucosa stomach
5 chr1:10035600-10051800 Weak transcription iPS-15b Cell Line embryonic stem cell
6 chr1:10036000-10050400 Weak transcription Primary hematopoietic stem cells blood
7 chr1:10036600-10047800 Weak transcription NHEK skin
8 chr1:10036800-10051200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
9 chr1:10037200-10054600 Weak transcription Fetal Brain Female brain
10 chr1:10039400-10050800 Weak transcription Colonic Mucosa Colon
11 chr1:10039600-10048200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr1:10039600-10053600 Weak transcription Colon Smooth Muscle Colon
13 chr1:10041000-10049200 Weak transcription iPS-20b Cell Line embryonic stem cell
14 chr1:10042600-10048800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr1:10042600-10050200 Weak transcription Lung lung
16 chr1:10042600-10050800 Weak transcription GM12878-XiMat blood
17 chr1:10042600-10053800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr1:10042800-10048600 Weak transcription Thymus Thymus
19 chr1:10042800-10049800 Weak transcription Placenta Placenta
20 chr1:10042800-10049800 Weak transcription Right Ventricle heart
21 chr1:10042800-10050200 Weak transcription Primary T cells fromperipheralblood blood
22 chr1:10042800-10050600 Weak transcription Pancreas Pancrea
23 chr1:10042800-10050800 Weak transcription Primary hematopoietic stem cells short term culture blood
24 chr1:10042800-10051200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
25 chr1:10042800-10051200 Weak transcription HSMMtube muscle
26 chr1:10042800-10051600 Weak transcription Fetal Thymus thymus
27 chr1:10042800-10051600 Weak transcription Rectal Smooth Muscle rectum
28 chr1:10042800-10053000 Weak transcription Duodenum Smooth Muscle Duodenum
29 chr1:10042800-10055600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
30 chr1:10042800-10056600 Weak transcription Cortex derived primary cultured neurospheres brain
31 chr1:10042800-10057200 Weak transcription Gastric stomach
32 chr1:10043000-10050400 Weak transcription Sigmoid Colon Sigmoid Colon
33 chr1:10043000-10050600 Weak transcription Primary T regulatory cells fromperipheralblood blood
34 chr1:10043400-10048000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr1:10044200-10047800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr1:10044200-10049600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr1:10044200-10049600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
38 chr1:10044200-10050000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
39 chr1:10044200-10050000 Weak transcription Left Ventricle heart
40 chr1:10044200-10050400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr1:10044200-10050400 Weak transcription Stomach Smooth Muscle stomach
42 chr1:10044200-10050600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
43 chr1:10044200-10050800 Weak transcription Muscle Satellite Cultured Cells --
44 chr1:10044400-10049800 Weak transcription Spleen Spleen
45 chr1:10044400-10050200 Weak transcription Primary T cells from cord blood blood
46 chr1:10044600-10049600 Weak transcription Adipose Nuclei Adipose
47 chr1:10044600-10050000 Weak transcription Skeletal Muscle Male skeletal muscle
48 chr1:10044600-10050800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
49 chr1:10044600-10054800 Weak transcription Fetal Intestine Large intestine
50 chr1:10044800-10048400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015