The 2.0 version of rSNPBase

Variant report

Variant rs12064809
Chromosome Location chr1:97832782-97832783
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:97794600-97848200 Weak transcription Left Ventricle heart
2 chr1:97802200-97848600 Weak transcription Primary T regulatory cells fromperipheralblood blood
3 chr1:97803200-97843200 Weak transcription Spleen Spleen
4 chr1:97805800-97846800 Weak transcription Primary T helper cells fromperipheralblood blood
5 chr1:97816000-97843200 Weak transcription Primary T cells fromperipheralblood blood
6 chr1:97818000-97844200 Weak transcription Osteobl bone
7 chr1:97820200-97848200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
8 chr1:97823800-97845600 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr1:97824000-97836800 Weak transcription Adipose Nuclei Adipose
10 chr1:97824000-97846800 Weak transcription Breast Myoepithelial Primary Cells Breast
11 chr1:97824200-97837800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr1:97824200-97843200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
13 chr1:97824200-97843200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
14 chr1:97824200-97846800 Weak transcription Fetal Intestine Small intestine
15 chr1:97824200-97848000 Weak transcription Ovary ovary
16 chr1:97824400-97855000 Weak transcription Lung lung
17 chr1:97827600-97847200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
18 chr1:97828000-97843200 Weak transcription Primary T killer naive cells fromperipheralblood blood
19 chr1:97828800-97849800 Weak transcription Primary T helper naive cells fromperipheralblood blood
20 chr1:97829200-97851000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
21 chr1:97829600-97836000 Strong transcription Primary T cells from cord blood blood
22 chr1:97829800-97834200 Strong transcription Liver Liver
23 chr1:97829800-97845000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr1:97830000-97834400 Enhancers HMEC breast
25 chr1:97830200-97839600 Strong transcription Primary monocytes fromperipheralblood blood
26 chr1:97830400-97848400 Strong transcription Monocytes-CD14+_RO01746 blood
27 chr1:97830600-97845000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr1:97830800-97843200 Weak transcription Muscle Satellite Cultured Cells --
29 chr1:97831000-97833200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr1:97831000-97843000 Weak transcription NH-A brain
31 chr1:97831000-97874800 Weak transcription HSMM muscle
32 chr1:97831400-97832800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr1:97831400-97833200 Strong transcription Primary T helper cells PMA-I stimulated --
34 chr1:97831400-97833800 Strong transcription Dnd41 blood
35 chr1:97832000-97832800 Strong transcription Primary B cells from cord blood blood
36 chr1:97832000-97832800 Strong transcription Primary hematopoietic stem cells blood
37 chr1:97832200-97832800 Strong transcription Primary neutrophils fromperipheralblood blood
38 chr1:97832200-97833400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr1:97832400-97832800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr1:97832400-97834400 Enhancers NHEK skin
41 chr1:97832600-97832800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
42 chr1:97832600-97833400 Enhancers NHLF lung
43 chr1:97832600-97843200 Weak transcription NHDF-Ad bronchial

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Last update: Aug 31, 2015